Literature DB >> 19807092

Substituent effects on the thermodynamic stability of imines formed from glycine and aromatic aldehydes: implications for the catalytic activity of pyridoxal-5'-phosphate.

Juan Crugeiras1, Ana Rios, Enrique Riveiros, John P Richard.   

Abstract

Equilibrium constants for addition of pan class="Chemical">glycine to substituted n>an class="Chemical">benzaldehydes to form the corresponding imines and pK(a)'s for ionization of the iminium ions were determined by (1)H NMR analysis in D(2)O. The introduction of a phenoxide anion substituent into the aromatic ring of benzaldehyde leads to a substantial increase in the pK(a) of the iminium ion from 6.3 to 10.2 for p-hydroxybenzaldehyde and to 12.1 for salicylaldehyde. An analysis of the differential effect of ortho- versus para-substitution shows that the iminium ion to salicylaldehyde is stabilized by an intramolecular hydrogen bond in aqueous solution, with an estimated energy ca. 3 kcal/mol larger than can be accounted for by a simple electrostatic interaction. A comparison of the o-O(-) substituent effect on the acidity of the iminium ions of glycine to benzaldehyde and 4-pyridine-carboxaldehyde provides evidence for the existence of an internal hydrogen bond of similar strength in pyridoxal 5'-phosphate (PLP) iminium ions in water. The effects of other ring substituents on the stability of PLP iminium ions are discussed.

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Year:  2009        PMID: 19807092      PMCID: PMC2788968          DOI: 10.1021/ja906230n

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  19 in total

1.  Glycine enolates: the large effect of iminium ion formation on alpha-amino carbon acidity.

Authors:  A Rios; J Crugeiras; T L Amyes; J P Richard
Journal:  J Am Chem Soc       Date:  2001-08-15       Impact factor: 15.419

2.  CATALYTIC REACTIONS INVOLVING AZOMETHINES. IV. RATES AND EQUILIBRIA OF IMINE FORMATION WITH PYRIDINE-4-ALDEHYDE AND VARIOUS AMINO ACIDS.

Authors:  T C FRENCH; T C BRUICE
Journal:  Biochemistry       Date:  1964-10       Impact factor: 3.162

Review 3.  Pyridoxal phosphate enzymes: mechanistic, structural, and evolutionary considerations.

Authors:  Andrew C Eliot; Jack F Kirsch
Journal:  Annu Rev Biochem       Date:  2004       Impact factor: 23.643

Review 4.  Structure, evolution and action of vitamin B6-dependent enzymes.

Authors:  J N Jansonius
Journal:  Curr Opin Struct Biol       Date:  1998-12       Impact factor: 6.809

Review 5.  Pyruvoyl-dependent enzymes.

Authors:  P D van Poelje; E E Snell
Journal:  Annu Rev Biochem       Date:  1990       Impact factor: 23.643

6.  15N nuclear magnetic resonance studies of acid-base properties of pyridoxal-5'-phosphate aldimines in aqueous solution.

Authors:  Shasad Sharif; Monique Chan Huot; Peter M Tolstoy; Michael D Toney; K Hanna M Jonsson; Hans-Heinrich Limbach
Journal:  J Phys Chem B       Date:  2007-03-23       Impact factor: 2.991

Review 7.  Reaction specificity in pyridoxal phosphate enzymes.

Authors:  Michael D Toney
Journal:  Arch Biochem Biophys       Date:  2005-01-01       Impact factor: 4.013

8.  Equilibrium studies involving Schiff base complexes. The zinc(II)--pyridoxal phosphate-glycine and -alpha-alanine systems.

Authors:  W L Felty; C G Ekstrom; D L Leussing
Journal:  J Am Chem Soc       Date:  1970-05-20       Impact factor: 15.419

9.  Stability of Schiff bases of amino acids and pyridoxal-5'-phosphate.

Authors:  M A Vázquez; F Muñoz; J Donoso; F García Blanco
Journal:  Amino Acids       Date:  1992-02       Impact factor: 3.520

10.  Resonance-assisted hydrogen bonds: a critical examination. Structure and stability of the enols of beta-diketones and beta-enaminones.

Authors:  Pablo Sanz; Otilia Mó; Manuel Yañez; José Elguero
Journal:  J Phys Chem A       Date:  2007-04-13       Impact factor: 2.781

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  13 in total

Review 1.  The PLP cofactor: lessons from studies on model reactions.

Authors:  John P Richard; Tina L Amyes; Juan Crugeiras; Ana Rios
Journal:  Biochim Biophys Acta       Date:  2010-12-20

2.  Biomimetic Generation and Remodeling of Phospholipid Membranes by Dynamic Imine Chemistry.

Authors:  Andrés Seoane; Roberto J Brea; Alberto Fuertes; Kira A Podolsky; Neal K Devaraj
Journal:  J Am Chem Soc       Date:  2018-06-13       Impact factor: 15.419

3.  Light-enhanced catalysis by pyridoxal phosphate-dependent aspartate aminotransferase.

Authors:  Melissa P Hill; Elizabeth C Carroll; Mai C Vang; Trevor A Addington; Michael D Toney; Delmar S Larsen
Journal:  J Am Chem Soc       Date:  2010-11-08       Impact factor: 15.419

Review 4.  Controlling reaction specificity in pyridoxal phosphate enzymes.

Authors:  Michael D Toney
Journal:  Biochim Biophys Acta       Date:  2011-06-06

Review 5.  Targeting biomolecules with reversible covalent chemistry.

Authors:  Anupam Bandyopadhyay; Jianmin Gao
Journal:  Curr Opin Chem Biol       Date:  2016-09-10       Impact factor: 8.822

6.  Substituent effects on electrophilic catalysis by the carbonyl group: anatomy of the rate acceleration for PLP-catalyzed deprotonation of glycine.

Authors:  Juan Crugeiras; Ana Rios; Enrique Riveiros; John P Richard
Journal:  J Am Chem Soc       Date:  2011-02-16       Impact factor: 15.419

7.  Antitumor agents 294. Novel E-ring-modified camptothecin-4β-anilino-4'-O-demethyl-epipodophyllotoxin conjugates as DNA topoisomerase I inhibitors and cytotoxic agents.

Authors:  Deyong Ye; Qian Shi; Chung-Hang Leung; Seung-Whan Kim; Shin-Young Park; Elizabeth A Gullen; Zao Li Jiang; Hao Zhu; Susan L Morris-Natschke; Yung-Chi Cheng; Kuo-Hsiung Lee
Journal:  Bioorg Med Chem       Date:  2012-05-19       Impact factor: 3.641

8.  Self-Healing Chitosan Hydrogels: Preparation and Rheological Characterization.

Authors:  Anda Mihaela Craciun; Simona Morariu; Luminita Marin
Journal:  Polymers (Basel)       Date:  2022-06-24       Impact factor: 4.967

9.  A small molecule inhibitor of redox-regulated protein translocation into mitochondria.

Authors:  Deepa V Dabir; Samuel A Hasson; Kiyoko Setoguchi; Meghan E Johnson; Piriya Wongkongkathep; Colin J Douglas; Johannes Zimmerman; Robert Damoiseaux; Michael A Teitell; Carla M Koehler
Journal:  Dev Cell       Date:  2013-04-15       Impact factor: 12.270

10.  Substituent Effects on Carbon Acidity in Aqueous Solution and at Enzyme Active Sites.

Authors:  Tina L Amyes; John P Richard
Journal:  Synlett       Date:  2017-03-10       Impact factor: 2.454

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