Literature DB >> 19805449

Statistical inference for exploratory data analysis and model diagnostics.

Andreas Buja1, Dianne Cook, Heike Hofmann, Michael Lawrence, Eun-Kyung Lee, Deborah F Swayne, Hadley Wickham.   

Abstract

We propose to furnish visual statistical methods with an inferential framework and protocol, modelled on confirmatory statistical testing. In this framework, plots take on the role of test statistics, and human cognition the role of statistical tests. Statistical significance of 'discoveries' is measured by having the human viewer compare the plot of the real dataset with collections of plots of simulated datasets. A simple but rigorous protocol that provides inferential validity is modelled after the 'lineup' popular from criminal legal procedures. Another protocol modelled after the 'Rorschach' inkblot test, well known from (pop-)psychology, will help analysts acclimatize to random variability before being exposed to the plot of the real data. The proposed protocols will be useful for exploratory data analysis, with reference datasets simulated by using a null assumption that structure is absent. The framework is also useful for model diagnostics in which case reference datasets are simulated from the model in question. This latter point follows up on previous proposals. Adopting the protocols will mean an adjustment in working procedures for data analysts, adding more rigour, and teachers might find that incorporating these protocols into the curriculum improves their students' statistical thinking.

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Year:  2009        PMID: 19805449     DOI: 10.1098/rsta.2009.0120

Source DB:  PubMed          Journal:  Philos Trans A Math Phys Eng Sci        ISSN: 1364-503X            Impact factor:   4.226


  9 in total

1.  Tutorial on platform for optical topography analysis tools.

Authors:  Stephanie Sutoko; Hiroki Sato; Atsushi Maki; Masashi Kiguchi; Yukiko Hirabayashi; Hirokazu Atsumori; Akiko Obata; Tsukasa Funane; Takusige Katura
Journal:  Neurophotonics       Date:  2016-01-11       Impact factor: 3.593

2.  Statistical challenges of high-dimensional data.

Authors:  Iain M Johnstone; D Michael Titterington
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2009-11-13       Impact factor: 4.226

3.  Data Visualization in Sociology.

Authors:  Kieran Healy; James Moody
Journal:  Annu Rev Sociol       Date:  2014-07

Review 4.  The Wally plot approach to assess the calibration of clinical prediction models.

Authors:  Paul Blanche; Thomas A Gerds; Claus T Ekstrøm
Journal:  Lifetime Data Anal       Date:  2017-12-06       Impact factor: 1.588

Review 5.  Big data sharing and analysis to advance research in post-traumatic epilepsy.

Authors:  Dominique Duncan; Paul Vespa; Asla Pitkänen; Adebayo Braimah; Niina Lapinlampi; Arthur W Toga
Journal:  Neurobiol Dis       Date:  2018-06-01       Impact factor: 5.996

6.  Too many zeros and/or highly skewed? A tutorial on modelling health behaviour as count data with Poisson and negative binomial regression.

Authors:  James A Green
Journal:  Health Psychol Behav Med       Date:  2021-05-06

7.  A graphical approach to assess the goodness-of-fit of random-effects linear models when the goal is to measure individual benefits of medical treatments in severely ill patients.

Authors:  Zhiwen Wang; Francisco J Diaz
Journal:  BMC Med Res Methodol       Date:  2020-07-20       Impact factor: 4.615

8.  Identifying Potential Factors Associated with High HIV viral load in KwaZulu-Natal, South Africa using Multiple Correspondence Analysis and Random Forest Analysis.

Authors:  Adenike O Soogun; Ayesha B M Kharsany; Temesgen Zewotir; Delia North; Ropo Ebenezer Ogunsakin
Journal:  BMC Med Res Methodol       Date:  2022-06-17       Impact factor: 4.612

9.  Hypothetical Outcome Plots Outperform Error Bars and Violin Plots for Inferences about Reliability of Variable Ordering.

Authors:  Jessica Hullman; Paul Resnick; Eytan Adar
Journal:  PLoS One       Date:  2015-11-16       Impact factor: 3.240

  9 in total

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