Literature DB >> 19805116

Structural basis of activation-dependent binding of ligand-mimetic antibody AL-57 to integrin LFA-1.

Hongmin Zhang1, Jin-Huan Liu, Wei Yang, Timothy Springer, Motomu Shimaoka, Jia-Huai Wang.   

Abstract

The activity of integrin LFA-1 (alpha(L)beta(2)) to its ligand ICAM-1 is regulated through the conformational changes of its ligand-binding domain, the I domain of alpha(L) chain, from an inactive, low-affinity closed form (LA), to an intermediate-affinity form (IA), and then finally, to a high-affinity open form (HA). A ligand-mimetic human monoclonal antibody AL-57 (activated LFA-1 clone 57) was identified by phage display to specifically recognize the affinity-upregulated I domain. Here, we describe the crystal structures of the Fab fragment of AL-57 in complex with IA, as well as in its unligated form. We discuss the structural features conferring AL-57's strong selectivity for the high affinity, open conformation of the I domain. The AL-57-binding site overlaps the ICAM-1 binding site on the I domain. Furthermore, an antibody Asp mimics an ICAM Glu by forming a coordination to the metal-ion dependent adhesion site (MIDAS). The structure also reveals better shape complementarity and a more hydrophobic interacting interface in AL-57 binding than in ICAM-1 binding. The results explain AL-57's antagonistic mimicry of LFA-1's natural ligands, the ICAM molecules.

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Year:  2009        PMID: 19805116      PMCID: PMC2775275          DOI: 10.1073/pnas.0909301106

Source DB:  PubMed          Journal:  Proc Natl Acad Sci U S A        ISSN: 0027-8424            Impact factor:   11.205


  25 in total

1.  The immunological synapse: a molecular machine controlling T cell activation.

Authors:  A Grakoui; S K Bromley; C Sumen; M M Davis; A S Shaw; P M Allen; M L Dustin
Journal:  Science       Date:  1999-07-09       Impact factor: 47.728

2.  Crystal structure of the alpha1beta1 integrin I domain in complex with an antibody Fab fragment.

Authors:  Michael Karpusas; Janine Ferrant; Paul H Weinreb; Amie Carmillo; Frederick R Taylor; Ellen A Garber
Journal:  J Mol Biol       Date:  2003-04-11       Impact factor: 5.469

3.  Reversibly locking a protein fold in an active conformation with a disulfide bond: integrin alphaL I domains with high affinity and antagonist activity in vivo.

Authors:  M Shimaoka; C Lu; R T Palframan; U H von Andrian; A McCormack; J Takagi; T A Springer
Journal:  Proc Natl Acad Sci U S A       Date:  2001-05-15       Impact factor: 11.205

4.  Structures of the alpha L I domain and its complex with ICAM-1 reveal a shape-shifting pathway for integrin regulation.

Authors:  Motomu Shimaoka; Tsan Xiao; Jin-Huan Liu; Yuting Yang; Yicheng Dong; Chang-Duk Jun; Alison McCormack; Rongguang Zhang; Andrzej Joachimiak; Junichi Takagi; Jia-Huai Wang; Timothy A Springer
Journal:  Cell       Date:  2003-01-10       Impact factor: 41.582

5.  Conformational changes in tertiary structure near the ligand binding site of an integrin I domain.

Authors:  C Oxvig; C Lu; T A Springer
Journal:  Proc Natl Acad Sci U S A       Date:  1999-03-02       Impact factor: 11.205

Review 6.  The three-dimensional structure of integrins and their ligands, and conformational regulation of cell adhesion.

Authors:  Timothy A Springer; Jia-Huai Wang
Journal:  Adv Protein Chem       Date:  2004

7.  The atomic structure of protein-protein recognition sites.

Authors:  L Lo Conte; C Chothia; J Janin
Journal:  J Mol Biol       Date:  1999-02-05       Impact factor: 5.469

8.  Identification and characterization of a human monoclonal antagonistic antibody AL-57 that preferentially binds the high-affinity form of lymphocyte function-associated antigen-1.

Authors:  Lili Huang; Motomu Shimaoka; Isaac J Rondon; Illa Roy; Qing Chang; Melody Po; Daniel T Dransfield; Robert C Ladner; Albert S B Edge; Azucena Salas; Clive R Wood; Timothy A Springer; Edward H Cohen
Journal:  J Leukoc Biol       Date:  2006-08-03       Impact factor: 4.962

9.  An unusual allosteric mobility of the C-terminal helix of a high-affinity alphaL integrin I domain variant bound to ICAM-5.

Authors:  Hongmin Zhang; Jose M Casasnovas; Moonsoo Jin; Jin-huan Liu; Carl G Gahmberg; Timothy A Springer; Jia-huai Wang
Journal:  Mol Cell       Date:  2008-08-08       Impact factor: 17.970

10.  MolProbity: all-atom contacts and structure validation for proteins and nucleic acids.

Authors:  Ian W Davis; Andrew Leaver-Fay; Vincent B Chen; Jeremy N Block; Gary J Kapral; Xueyi Wang; Laura W Murray; W Bryan Arendall; Jack Snoeyink; Jane S Richardson; David C Richardson
Journal:  Nucleic Acids Res       Date:  2007-04-22       Impact factor: 16.971

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  15 in total

1.  2E8 binds to the high affinity I-domain in a metal ion-dependent manner: a second generation monoclonal antibody selectively targeting activated LFA-1.

Authors:  Roberto Carreño; Wells S Brown; Dan Li; Jessica A Hernandez; Yang Wang; Tae Kon Kim; John W Craft; Krishna V Komanduri; Laszlo G Radvanyi; Patrick Hwu; Jeffrey J Molldrem; Glen B Legge; Bradley W McIntyre; Qing Ma
Journal:  J Biol Chem       Date:  2010-08-19       Impact factor: 5.157

2.  Structure of Streptococcus agalactiae tip pilin GBS104: a model for GBS pili assembly and host interactions.

Authors:  Vengadesan Krishnan; Prabhat Dwivedi; Brandon J Kim; Alexandra Samal; Kevin Macon; Xin Ma; Arunima Mishra; Kelly S Doran; Hung Ton-That; Sthanam V L Narayana
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2013-05-15

3.  Crystal structure of the antigen-binding fragment of a monoclonal antibody specific for the multidrug-resistance-linked ABC transporter human P-glycoprotein.

Authors:  Lothar Esser; Suneet Shukla; Fei Zhou; Suresh V Ambudkar; Di Xia
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2016-07-27       Impact factor: 1.056

4.  Selective Targeting of High-Affinity LFA-1 Does Not Augment Costimulation Blockade in a Nonhuman Primate Renal Transplantation Model.

Authors:  K P Samy; D J Anderson; D J Lo; M S Mulvihill; M Song; A B Farris; B S Parker; A L MacDonald; C Lu; T A Springer; S C Kachlany; K A Reimann; T How; F V Leopardi; K S Franke; K D Williams; B H Collins; A D Kirk
Journal:  Am J Transplant       Date:  2017-01-27       Impact factor: 8.086

5.  Sevoflurane binds and allosterically blocks integrin lymphocyte function-associated antigen-1.

Authors:  Koichi Yuki; Nathan S Astrof; Clay Bracken; Sulpicio G Soriano; Motomu Shimaoka
Journal:  Anesthesiology       Date:  2010-09       Impact factor: 7.892

6.  Stable coordination of the inhibitory Ca2+ ion at the metal ion-dependent adhesion site in integrin CD11b/CD18 by an antibody-derived ligand aspartate: implications for integrin regulation and structure-based drug design.

Authors:  Bhuvaneshwari Mahalingam; Kaouther Ajroud; José Luis Alonso; Saurabh Anand; Brian D Adair; Alberto L Horenstein; Fabio Malavasi; Jian-Ping Xiong; M Amin Arnaout
Journal:  J Immunol       Date:  2011-11-16       Impact factor: 5.422

7.  Small molecule agonists of integrin CD11b/CD18 do not induce global conformational changes and are significantly better than activating antibodies in reducing vascular injury.

Authors:  Mohd Hafeez Faridi; Mehmet M Altintas; Camilo Gomez; Juan Camilo Duque; Roberto I Vazquez-Padron; Vineet Gupta
Journal:  Biochim Biophys Acta       Date:  2013-02-26

8.  Dynamic structural changes are observed upon collagen and metal ion binding to the integrin α1 I domain.

Authors:  Paul H Weinreb; Sheng Li; Sharon X Gao; Tong Liu; R Blake Pepinsky; Justin A Caravella; Jun H Lee; Virgil L Woods
Journal:  J Biol Chem       Date:  2012-07-30       Impact factor: 5.157

9.  NMR characterization of the conformational fluctuations of the human lymphocyte function-associated antigen-1 I-domain.

Authors:  Hoi Tik Alvin Leung; Predrag Kukic; Carlo Camilloni; Francesco Bemporad; Alfonso De Simone; Francesco A Aprile; Janet R Kumita; Michele Vendruscolo
Journal:  Protein Sci       Date:  2014-09-05       Impact factor: 6.725

10.  Structure and dynamics of the integrin LFA-1 I-domain in the inactive state underlie its inside-out/outside-in signaling and allosteric mechanisms.

Authors:  Predrag Kukic; Hoi Tik Alvin Leung; Francesco Bemporad; Francesco A Aprile; Janet R Kumita; Alfonso De Simone; Carlo Camilloni; Michele Vendruscolo
Journal:  Structure       Date:  2015-03-12       Impact factor: 5.006

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