Literature DB >> 19802819

Identifying protein stabilizing ligands using GroEL.

Subhashchandra Naik1, Inamul Haque, Nick Degner, Boris Kornilayev, Gregory Bomhoff, Jacob Hodges, Ara-Azad Khorassani, Hiroo Katayama, Jill Morris, Jeffery Kelly, John Seed, Mark T Fisher.   

Abstract

Over the past 5 years, it has become increasingly apparent to researchers that the initial promise and excitement of using gene replacement therapies to ameliorate folding diseases are still far from being broadly or easily applicable. Because a large number of human diseases are protein folding diseases (approximately 30 to 50%), many researchers now realize that more directed approaches to target and reverse the fundamental misfolding reactions preceding disease are highly feasible and offer the potential of developing more targeted drug therapies. This is also true with a large number of so called orphan protein folding diseases. The development of a broad-based general screening array method using the chaperonin as a detection platform will enable us to screen large chemical combinatorial libraries for specific ligands against the elusive transient, primary reactions that often lead to protein misfolding. This development will provide a highly desirable tool for the pharmaceutical, academic, and medical professions. (c) 2009 Wiley Periodicals, Inc.

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Year:  2010        PMID: 19802819      PMCID: PMC2805906          DOI: 10.1002/bip.21319

Source DB:  PubMed          Journal:  Biopolymers        ISSN: 0006-3525            Impact factor:   2.505


  32 in total

Review 1.  Native state kinetic stabilization as a strategy to ameliorate protein misfolding diseases: a focus on the transthyretin amyloidoses.

Authors:  Steven M Johnson; R Luke Wiseman; Yoshiki Sekijima; Nora S Green; Sara L Adamski-Werner; Jeffery W Kelly
Journal:  Acc Chem Res       Date:  2005-12       Impact factor: 22.384

Review 2.  Free-energy landscape of enzyme catalysis.

Authors:  Stephen J Benkovic; Gordon G Hammes; Sharon Hammes-Schiffer
Journal:  Biochemistry       Date:  2008-02-26       Impact factor: 3.162

Review 3.  HSP90 and the chaperoning of cancer.

Authors:  Luke Whitesell; Susan L Lindquist
Journal:  Nat Rev Cancer       Date:  2005-10       Impact factor: 60.716

4.  Small-molecule-mediated stabilization of familial amyotrophic lateral sclerosis-linked superoxide dismutase mutants against unfolding and aggregation.

Authors:  Soumya S Ray; Richard J Nowak; Robert H Brown; Peter T Lansbury
Journal:  Proc Natl Acad Sci U S A       Date:  2005-02-28       Impact factor: 11.205

5.  The effects of the flavonoid baicalein and osmolytes on the Mg 2+ accelerated aggregation/fibrillation of carboxymethylated bovine 1SS-alpha-lactalbumin.

Authors:  Greg Bomhoff; Kirk Sloan; Corey McLain; Edward P Gogol; Mark T Fisher
Journal:  Arch Biochem Biophys       Date:  2006-02-23       Impact factor: 4.013

6.  Roles of heat-shock protein 90 in maintaining and facilitating the neurodegenerative phenotype in tauopathies.

Authors:  Wenjie Luo; Fei Dou; Anna Rodina; Sophorn Chip; Joungnam Kim; Qi Zhao; Kamalika Moulick; Julia Aguirre; Nian Wu; Paul Greengard; Gabriela Chiosis
Journal:  Proc Natl Acad Sci U S A       Date:  2007-05-21       Impact factor: 11.205

Review 7.  Discovery and development of heat shock protein 90 inhibitors.

Authors:  Tony Taldone; Weilin Sun; Gabriela Chiosis
Journal:  Bioorg Med Chem       Date:  2008-11-06       Impact factor: 3.641

8.  Amyloid formation under physiological conditions proceeds via a native-like folding intermediate.

Authors:  Thomas R Jahn; Martin J Parker; Steve W Homans; Sheena E Radford
Journal:  Nat Struct Mol Biol       Date:  2006-02-19       Impact factor: 15.369

Review 9.  Rescue of folding defects in ABC transporters using pharmacological chaperones.

Authors:  Tip W Loo; M Claire Bartlett; David M Clarke
Journal:  J Bioenerg Biomembr       Date:  2005-12       Impact factor: 3.853

10.  GroEL as a molecular scaffold for structural analysis of the anthrax toxin pore.

Authors:  Hiroo Katayama; Blythe E Janowiak; Marek Brzozowski; Jordan Juryck; Scott Falke; Edward P Gogol; R John Collier; Mark T Fisher
Journal:  Nat Struct Mol Biol       Date:  2008-06-22       Impact factor: 15.369

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  5 in total

1.  Probing structurally altered and aggregated states of therapeutically relevant proteins using GroEL coupled to bio-layer interferometry.

Authors:  Subhashchandra Naik; Ozan S Kumru; Melissa Cullom; Srivalli N Telikepalli; Elizabeth Lindboe; Taylor L Roop; Sangeeta B Joshi; Divya Amin; Phillip Gao; C Russell Middaugh; David B Volkin; Mark T Fisher
Journal:  Protein Sci       Date:  2014-07-28       Impact factor: 6.725

Review 2.  On the design of broad based screening assays to identify potential pharmacological chaperones of protein misfolding diseases.

Authors:  Subhashchandra Naik; Na Zhang; Phillip Gao; Mark T Fisher
Journal:  Curr Top Med Chem       Date:  2012       Impact factor: 3.295

3.  Chaperonin-Based Biolayer Interferometry To Assess the Kinetic Stability of Metastable, Aggregation-Prone Proteins.

Authors:  Wendy A Lea; Pierce T O'Neil; Alexandra J Machen; Subhashchandra Naik; Tapan Chaudhri; Wesley McGinn-Straub; Alexander Tischer; Matthew T Auton; Joshua R Burns; Michael R Baldwin; Karen R Khar; John Karanicolas; Mark T Fisher
Journal:  Biochemistry       Date:  2016-08-19       Impact factor: 3.162

4.  Probing the kinetic stabilities of Friedreich's ataxia clinical variants using a solid phase GroEL chaperonin capture platform.

Authors:  Ana R Correia; Subhashchandra Naik; Mark T Fisher; Cláudio M Gomes
Journal:  Biomolecules       Date:  2014-10-20

5.  The Chaperonin GroEL: A Versatile Tool for Applied Biotechnology Platforms.

Authors:  Pierce T O'Neil; Alexandra J Machen; Benjamin C Deatherage; Caleb Trecazzi; Alexander Tischer; Venkata R Machha; Matthew T Auton; Michael R Baldwin; Tommi A White; Mark T Fisher
Journal:  Front Mol Biosci       Date:  2018-05-15
  5 in total

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