Literature DB >> 19797766

Long-range spreading of dosage compensation in Drosophila captures transcribed autosomal genes inserted on X.

Andrey A Gorchakov1, Artyom A Alekseyenko, Peter Kharchenko, Peter J Park, Mitzi I Kuroda.   

Abstract

Dosage compensation in Drosophila melanogaster males is achieved via targeting of male-specific lethal (MSL) complex to X-linked genes. This is proposed to involve sequence-specific recognition of the X at approximately 150-300 chromatin entry sites, and subsequent spreading to active genes. Here we ask whether the spreading step requires transcription and is sequence-independent. We find that MSL complex binds, acetylates, and up-regulates autosomal genes inserted on X, but only if transcriptionally active. We conclude that a long-sought specific DNA sequence within X-linked genes is not obligatory for MSL binding. Instead, linkage and transcription play the pivotal roles in MSL targeting irrespective of gene origin and DNA sequence.

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Year:  2009        PMID: 19797766      PMCID: PMC2758747          DOI: 10.1101/gad.1840409

Source DB:  PubMed          Journal:  Genes Dev        ISSN: 0890-9369            Impact factor:   11.361


  35 in total

1.  Epigenetic aspects of X-chromosome dosage compensation.

Authors:  Y Park; M I Kuroda
Journal:  Science       Date:  2001-08-10       Impact factor: 47.728

2.  The drosophila MSL complex acetylates histone H4 at lysine 16, a chromatin modification linked to dosage compensation.

Authors:  E R Smith; A Pannuti; W Gu; A Steurnagel; R G Cook; C D Allis; J C Lucchesi
Journal:  Mol Cell Biol       Date:  2000-01       Impact factor: 4.272

3.  Lack of dosage compensation for an autosomal gene relocated to the X chromosome in Drosophila melanogaster.

Authors:  R L Roehrdanz; J M Kitchens; J C Lucchesi
Journal:  Genetics       Date:  1977-03       Impact factor: 4.562

4.  The roX genes encode redundant male-specific lethal transcripts required for targeting of the MSL complex.

Authors:  Victoria H Meller; Barbara P Rattner
Journal:  EMBO J       Date:  2002-03-01       Impact factor: 11.598

5.  The cloned dopa decarboxylase gene is developmentally regulated when reintegrated into the Drosophila genome.

Authors:  S B Scholnick; B A Morgan; J Hirsh
Journal:  Cell       Date:  1983-08       Impact factor: 41.582

6.  Construction of transgenic Drosophila by using the site-specific integrase from phage phiC31.

Authors:  Amy C Groth; Matthew Fish; Roel Nusse; Michele P Calos
Journal:  Genetics       Date:  2004-04       Impact factor: 4.562

7.  The effect of chromosomal position on the expression of the Drosophila xanthine dehydrogenase gene.

Authors:  A C Spradling; G M Rubin
Journal:  Cell       Date:  1983-08       Impact factor: 41.582

8.  Multiple classes of MSL binding sites target dosage compensation to the X chromosome of Drosophila.

Authors:  Hyangyee Oh; James R Bone; Mitzi I Kuroda
Journal:  Curr Biol       Date:  2004-03-23       Impact factor: 10.834

9.  Multiple upstream regulatory elements control the expression of the Drosophila white gene.

Authors:  V Pirrotta; H Steller; M P Bozzetti
Journal:  EMBO J       Date:  1985-12-16       Impact factor: 11.598

10.  Drosophila MSL complex globally acetylates H4K16 on the male X chromosome for dosage compensation.

Authors:  Marnie E Gelbart; Erica Larschan; Shouyong Peng; Peter J Park; Mitzi I Kuroda
Journal:  Nat Struct Mol Biol       Date:  2009-08-02       Impact factor: 15.369

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  30 in total

1.  The genomic binding sites of a noncoding RNA.

Authors:  Matthew D Simon; Charlotte I Wang; Peter V Kharchenko; Jason A West; Brad A Chapman; Artyom A Alekseyenko; Mark L Borowsky; Mitzi I Kuroda; Robert E Kingston
Journal:  Proc Natl Acad Sci U S A       Date:  2011-12-05       Impact factor: 11.205

Review 2.  Divergent actions of long noncoding RNAs on X-chromosome remodelling in mammals and Drosophila achieve the same end result: dosage compensation.

Authors:  Subhash C Lakhotia
Journal:  J Genet       Date:  2015-12       Impact factor: 1.166

Review 3.  Dosage compensation in Drosophila.

Authors:  John C Lucchesi; Mitzi I Kuroda
Journal:  Cold Spring Harb Perspect Biol       Date:  2015-05-01       Impact factor: 10.005

4.  Drosophila Dosage Compensation Loci Associate with a Boundary-Forming Insulator Complex.

Authors:  Emily G Kaye; Amina Kurbidaeva; Daniel Wolle; Tsutomu Aoki; Paul Schedl; Erica Larschan
Journal:  Mol Cell Biol       Date:  2017-10-13       Impact factor: 4.272

Review 5.  Dosage Compensation in Drosophila-a Model for the Coordinate Regulation of Transcription.

Authors:  Mitzi I Kuroda; Andres Hilfiker; John C Lucchesi
Journal:  Genetics       Date:  2016-10       Impact factor: 4.562

Review 6.  Targeting X chromosomes for repression.

Authors:  Barbara J Meyer
Journal:  Curr Opin Genet Dev       Date:  2010-04-08       Impact factor: 5.578

7.  Chromatin proteins captured by ChIP-mass spectrometry are linked to dosage compensation in Drosophila.

Authors:  Charlotte I Wang; Artyom A Alekseyenko; Gary LeRoy; Andrew E H Elia; Andrey A Gorchakov; Laura-Mae P Britton; Stephen J Elledge; Peter V Kharchenko; Benjamin A Garcia; Mitzi I Kuroda
Journal:  Nat Struct Mol Biol       Date:  2013-01-06       Impact factor: 15.369

8.  A sequence motif enriched in regions bound by the Drosophila dosage compensation complex.

Authors:  Miguel Gallach; Vicente Arnau; Rodrigo Aldecoa; Ignacio Marín
Journal:  BMC Genomics       Date:  2010-03-12       Impact factor: 3.969

9.  The DNA binding CXC domain of MSL2 is required for faithful targeting the Dosage Compensation Complex to the X chromosome.

Authors:  Torsten Fauth; Felix Müller-Planitz; Cornelia König; Tobias Straub; Peter B Becker
Journal:  Nucleic Acids Res       Date:  2010-02-05       Impact factor: 16.971

10.  Chromatin landscape dictates HSF binding to target DNA elements.

Authors:  Michael J Guertin; John T Lis
Journal:  PLoS Genet       Date:  2010-09-09       Impact factor: 5.917

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