Literature DB >> 19793314

A bioinformatics approach to ascertaining the rarity of HLA alleles.

D Middleton1, F Gonzalez, M Fernandez-Vina, J-M Tiercy, S G E Marsh, M Aubrey, M G Bicalho, A Canossi, V Carter, S Cate, F R Guerini, P Loiseau, M Martinetti, M E Moraes, V Morales, J Perasaari, M Setterholm, M Sprague, S Tavoularis, M Torres, S Vidal, C Witt, G Wohlwend, K L Yang.   

Abstract

A project of the 15th International Histocompatibility Workshop examined the rarity of human leukocyte antigen (HLA) alleles. A section was constructed in the website, www.allelefrequencies.net to contain this data from different sources. A mechanism to search the data was implemented for use by any individual.

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Year:  2009        PMID： 19793314     DOI： 10.1111/j.1399-0039.2009.01361.x

Source DB:  PubMed          Journal:  Tissue Antigens        ISSN： 0001-2815


  10 in total

1.  Analytical methods for immunogenetic population data.

Authors:  Steven J Mack; Pierre-Antoine Gourraud; Richard M Single; Glenys Thomson; Jill A Hollenbach
Journal:  Methods Mol Biol       Date:  2012

Review 2.  Allele frequencies database.

Authors:  Louise Y C Takeshita; Andrew R Jones; Faviel F Gonzalez-Galarza; Derek Middleton
Journal:  Transfus Med Hemother       Date:  2014-10       Impact factor: 3.747

3.  A one-step DNA sequencing strategy to HLA type hematopoietic stem cell donors at recruitment - rethinking typing strategies.

Authors:  B Tu; N Cha; R Yang; J Ng; C K Hurley
Journal:  Tissue Antigens       Date:  2013-03

4.  A community standard for immunogenomic data reporting and analysis: proposal for a STrengthening the REporting of Immunogenomic Studies statement.

Authors:  J A Hollenbach; S J Mack; P-A Gourraud; R M Single; M Maiers; D Middleton; G Thomson; S G E Marsh; M D Varney
Journal:  Tissue Antigens       Date:  2011-11

5.  Associations of HLA-A, HLA-B and HLA-C alleles frequency with prevalence of herpes simplex virus infections and diseases across global populations: implication for the development of an universal CD8+ T-cell epitope-based vaccine.

Authors:  Sarah Samandary; Hédia Kridane-Miledi; Jacqueline S Sandoval; Zareen Choudhury; Francina Langa-Vives; Doran Spencer; Aziz A Chentoufi; François A Lemonnier; Lbachir BenMohamed
Journal:  Hum Immunol       Date:  2014-05-04       Impact factor: 2.850

Review 6.  Immunogenetics as a tool in anthropological studies.

Authors:  Alicia Sanchez-Mazas; Marcelo Fernandez-Viña; Derek Middleton; Jill A Hollenbach; Stéphane Buhler; Da Di; Raja Rajalingam; Jean-Michel Dugoujon; Steven J Mack; Erik Thorsby
Journal:  Immunology       Date:  2011-04-11       Impact factor: 7.397

7.  Collection and storage of HLA NGS genotyping data for the 17th International HLA and Immunogenetics Workshop.

Authors:  Chia-Jung Chang; Kazutoyo Osoegawa; Robert P Milius; Martin Maiers; Wenzhong Xiao; Marcelo Fernandez-Viňa; Steven J Mack
Journal:  Hum Immunol       Date:  2017-12-14       Impact factor: 2.850

Review 8.  The extensive polymorphism of KIR genes.

Authors:  Derek Middleton; Faviel Gonzelez
Journal:  Immunology       Date:  2010-01       Impact factor: 7.397

9.  Strategies to work with HLA data in human populations for histocompatibility, clinical transplantation, epidemiology and population genetics: HLA-NET methodological recommendations.

Authors:  A Sanchez-Mazas; B Vidan-Jeras; J M Nunes; G Fischer; A-M Little; U Bekmane; S Buhler; S Buus; F H J Claas; A Dormoy; V Dubois; E Eglite; J F Eliaou; F Gonzalez-Galarza; Z Grubic; M Ivanova; B Lie; D Ligeiro; M L Lokki; B Martins da Silva; J Martorell; D Mendonça; D Middleton; D Papioannou Voniatis; C Papasteriades; F Poli; M E Riccio; M Spyropoulou Vlachou; G Sulcebe; S Tonks; M Toungouz Nevessignsky; C Vangenot; A-M van Walraven; J-M Tiercy
Journal:  Int J Immunogenet       Date:  2012-04-26       Impact factor: 1.466

10.  Allele frequency net: a database and online repository for immune gene frequencies in worldwide populations.

Authors:  Faviel F Gonzalez-Galarza; Stephen Christmas; Derek Middleton; Andrew R Jones
Journal:  Nucleic Acids Res       Date:  2010-11-09       Impact factor: 16.971
  10 in total

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