Literature DB >> 21480890

Immunogenetics as a tool in anthropological studies.

Alicia Sanchez-Mazas1, Marcelo Fernandez-Viña, Derek Middleton, Jill A Hollenbach, Stéphane Buhler, Da Di, Raja Rajalingam, Jean-Michel Dugoujon, Steven J Mack, Erik Thorsby.   

Abstract

The genes coding for the main molecules involved in the human immune system--immunoglobulins, human leucocyte antigen (HLA) molecules and killer-cell immunoglobulin-like receptors (KIR)--exhibit a very high level of polymorphism that reveals remarkable frequency variation in human populations. 'Genetic marker' (GM) allotypes located in the constant domains of IgG antibodies have been studied for over 40 years through serological typing, leading to the identification of a variety of GM haplotypes whose frequencies vary sharply from one geographic region to another. An impressive diversity of HLA alleles, which results in amino acid substitutions located in the antigen-binding region of HLA molecules, also varies greatly among populations. The KIR differ between individuals according to both gene content and allelic variation, and also display considerable population diversity. Whereas the molecular evolution of these polymorphisms has most likely been subject to natural selection, principally driven by host-pathogen interactions, their patterns of genetic variation worldwide show significant signals of human geographic expansion, demographic history and cultural diversification. As current developments in population genetic analysis and computer simulation improve our ability to discriminate among different--either stochastic or deterministic--forces acting on the genetic evolution of human populations, the study of these systems shows great promise for investigating both the peopling history of modern humans in the time since their common origin and human adaptation to past environmental (e.g. pathogenic) changes. Therefore, in addition to mitochondrial DNA, Y-chromosome, microsatellites, single nucleotide polymorphisms and other markers, immunogenetic polymorphisms represent essential and complementary tools for anthropological studies.
© 2011 The Authors. Immunology © 2011 Blackwell Publishing Ltd.

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Year:  2011        PMID: 21480890      PMCID: PMC3088978          DOI: 10.1111/j.1365-2567.2011.03438.x

Source DB:  PubMed          Journal:  Immunology        ISSN: 0019-2805            Impact factor:   7.397


  123 in total

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2.  Evolution of HLA class II molecules: Allelic and amino acid site variability across populations.

Authors:  H Salamon; W Klitz; S Easteal; X Gao; H A Erlich; M Fernandez-Viña; E A Trachtenberg; S K McWeeney; M P Nelson; G Thomson
Journal:  Genetics       Date:  1999-05       Impact factor: 4.562

3.  Agglutination of erythrocytes coated with incomplete anti-Rh by certain rheumatoid arthritic sera and some other sera; the existence of human serum groups.

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4.  HLA evidence for the lack of genetic heterogeneity in Basques.

Authors:  D Comas; F Calafell; E Mateu; A Pérez-Lezaun; J Bertranpetit
Journal:  Ann Hum Genet       Date:  1998-03       Impact factor: 1.670

5.  HLA class I and class II DNA typing and the origin of Basques.

Authors:  D Comas; E Mateu; F Calafell; A Pérez-Lezaun; E Bosch; R Martínez-Arias; J Bertranpetit
Journal:  Tissue Antigens       Date:  1998-01

6.  Differences in HLA class II alleles of isolated South American Indian populations from Brazil and Argentina.

Authors:  M Cerna; M Falco; H Friedman; E Raimondi; A Maccagno; M Fernandez-Viña; P Stastny
Journal:  Hum Immunol       Date:  1993-08       Impact factor: 2.850

7.  Immunoglobulin allotypes among the Bicolanos of Sorsogon province, Luzon, Philippines: implications of phenotypes for filariasis.

Authors:  M A Kron; B Ramirez; V Belizario; J P Pandey
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8.  Functionally and structurally distinct NK cell receptor repertoires in the peripheral blood of two human donors.

Authors:  N M Valiante; M Uhrberg; H G Shilling; K Lienert-Weidenbach; K L Arnett; A D'Andrea; J H Phillips; L L Lanier; P Parham
Journal:  Immunity       Date:  1997-12       Impact factor: 31.745

9.  Dissimilar evolution of B-locus versus A-locus and class II loci of the HLA region in South American Indian tribes.

Authors:  M A Fernández-Viña; A M Lázaro; C Y Marcos; C Nulf; E Raimondi; E J Haas; P Stastny
Journal:  Tissue Antigens       Date:  1997-09

10.  Clines of nuclear DNA markers suggest a largely neolithic ancestry of the European gene pool.

Authors:  L Chikhi; G Destro-Bisol; G Bertorelle; V Pascali; G Barbujani
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  36 in total

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2.  HLA class I, KIR, and genome-wide SNP diversity in the RV144 Thai phase 3 HIV vaccine clinical trial.

Authors:  Heather A Prentice; Philip K Ehrenberg; Karen M Baldwin; Aviva Geretz; Charla Andrews; Sorachai Nitayaphan; Supachai Rerks-Ngarm; Jaranit Kaewkungwal; Punnee Pitisuttithum; Robert J O'Connell; Merlin L Robb; Jerome H Kim; Nelson L Michael; Rasmi Thomas
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3.  The Polynesian gene pool: an early contribution by Amerindians to Easter Island.

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Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-03-19       Impact factor: 6.237

4.  Distinct evolutionary strategies of human leucocyte antigen loci in pathogen-rich environments.

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Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-03-19       Impact factor: 6.237

Review 5.  Tracking human migrations by the analysis of the distribution of HLA alleles, lineages and haplotypes in closed and open populations.

Authors:  Marcelo A Fernandez Vina; Jill A Hollenbach; Kirsten E Lyke; Marcelo B Sztein; Martin Maiers; William Klitz; Pedro Cano; Steven Mack; Richard Single; Chaim Brautbar; Shosahna Israel; Eduardo Raimondi; Evelyne Khoriaty; Adlette Inati; Marco Andreani; Manuela Testi; Maria Elisa Moraes; Glenys Thomson; Peter Stastny; Kai Cao
Journal:  Philos Trans R Soc Lond B Biol Sci       Date:  2012-03-19       Impact factor: 6.237

6.  Diversity of killer cell immunoglobulin-like receptor genes in Southern Turkey.

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7.  High-resolution characterization of allelic and haplotypic HLA frequency distribution in a Spanish population using high-throughput next-generation sequencing.

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8.  HLA variation reveals genetic continuity rather than population group structure in East Asia.

Authors:  Da Di; Alicia Sanchez-Mazas
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9.  Multiple mismatches at the low expression HLA loci DP, DQ, and DRB3/4/5 associate with adverse outcomes in hematopoietic stem cell transplantation.

Authors:  Marcelo A Fernández-Viña; John P Klein; Michael Haagenson; Stephen R Spellman; Claudio Anasetti; Harriet Noreen; Lee Ann Baxter-Lowe; Pedro Cano; Neal Flomenberg; Dennis L Confer; Mary M Horowitz; Machteld Oudshoorn; Effie W Petersdorf; Michelle Setterholm; Richard Champlin; Stephanie J Lee; Marcos de Lima
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10.  The distribution of HLA haplotypes in the ethnic groups that make up the Brazilian Bone Marrow Volunteer Donor Registry (REDOME).

Authors:  Michael Halagan; Danielli Cristina Oliveira; Martin Maiers; Raquel A Fabreti-Oliveira; Maria Elisa Hue Moraes; Jeane Eliete Laguila Visentainer; Noemi Farah Pereira; Matilde Romero; Juliana Fernandes Cardoso; Luís Cristóvão Porto
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