Literature DB >> 19792172

Dynamics of populations and networks of neurons with voltage-activated and calcium-activated currents.

Magnus J E Richardson1.   

Abstract

The profile of transmembrane-channel expression in neurons is class dependent and a crucial determinant of neuronal dynamics. Here, a generalization of the experimentally verified exponential integrate-and-fire model is introduced that includes biophysical, nonlinear gated conductance-based currents, and a spike shape. A Fokker-Planck-based method is developed that allows for the rapid numerical calculation of steady-state and linear-response properties for recurrent networks of neurons with gating-variable dynamics slower than that of the voltage. This limit includes many cases of biological interest, particularly under in vivo conditions of high synaptic conductance. The utility of the method is illustrated by applying it to two biophysically detailed models adapted from the literature: an entorhinal layer-II cortical neuron and a neuron featuring both calcium-activated and voltage-activated spike-frequency-adaptation currents. The framework generalizes to networks comprised of different neuronal classes and so will allow for the modeling of emergent states in neural tissue at significantly increased levels of biological detail.

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Year:  2009        PMID: 19792172     DOI: 10.1103/PhysRevE.80.021928

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  19 in total

1.  GAD67-GFP+ neurons in the Nucleus of Roller. II. Subthreshold and firing resonance properties.

Authors:  J F M van Brederode; A J Berger
Journal:  J Neurophysiol       Date:  2010-11-03       Impact factor: 2.714

2.  Correlation Transfer by Layer 5 Cortical Neurons Under Recreated Synaptic Inputs In Vitro.

Authors:  Daniele Linaro; Gabriel K Ocker; Brent Doiron; Michele Giugliano
Journal:  J Neurosci       Date:  2019-07-25       Impact factor: 6.167

3.  The impact of spike-frequency adaptation on balanced network dynamics.

Authors:  Victor J Barranca; Han Huang; Sida Li
Journal:  Cogn Neurodyn       Date:  2018-09-03       Impact factor: 5.082

4.  Towards a theory of cortical columns: From spiking neurons to interacting neural populations of finite size.

Authors:  Tilo Schwalger; Moritz Deger; Wulfram Gerstner
Journal:  PLoS Comput Biol       Date:  2017-04-19       Impact factor: 4.475

5.  Dynamics of the exponential integrate-and-fire model with slow currents and adaptation.

Authors:  Victor J Barranca; Daniel C Johnson; Jennifer L Moyher; Joshua P Sauppe; Maxim S Shkarayev; Gregor Kovačič; David Cai
Journal:  J Comput Neurosci       Date:  2014-01-18       Impact factor: 1.621

6.  Low-dimensional spike rate models derived from networks of adaptive integrate-and-fire neurons: Comparison and implementation.

Authors:  Moritz Augustin; Josef Ladenbauer; Fabian Baumann; Klaus Obermayer
Journal:  PLoS Comput Biol       Date:  2017-06-23       Impact factor: 4.475

7.  Coding and decoding with adapting neurons: a population approach to the peri-stimulus time histogram.

Authors:  Richard Naud; Wulfram Gerstner
Journal:  PLoS Comput Biol       Date:  2012-10-04       Impact factor: 4.475

8.  How noisy adaptation of neurons shapes interspike interval histograms and correlations.

Authors:  Tilo Schwalger; Karin Fisch; Jan Benda; Benjamin Lindner
Journal:  PLoS Comput Biol       Date:  2010-12-16       Impact factor: 4.475

9.  Impact of network structure and cellular response on spike time correlations.

Authors:  James Trousdale; Yu Hu; Eric Shea-Brown; Krešimir Josić
Journal:  PLoS Comput Biol       Date:  2012-03-22       Impact factor: 4.475

10.  How adaptation shapes spike rate oscillations in recurrent neuronal networks.

Authors:  Moritz Augustin; Josef Ladenbauer; Klaus Obermayer
Journal:  Front Comput Neurosci       Date:  2013-02-27       Impact factor: 2.380

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