Literature DB >> 19786126

Effect of detergent concentration on the thermal stability of a membrane protein: The case study of bacterial reaction center solubilized by N,N-dimethyldodecylamine-N-oxide.

Gerardo Palazzo1, Francesco Lopez, Antonia Mallardi.   

Abstract

We report on the response of reaction center (RC) from Rhodobacter sphaeroides (an archetype of membrane proteins) to the exposure at high temperature. The RCs have been solubilized in aqueous solution of the detergent N,N-dimethyldodecylamine-N-oxide (LDAO). Changes in the protein conformation have been probed by monitoring the variation in the absorbance of the bacteriochlorine cofactors and modification in the efficiency of energy transfer from tryptophans to cofactors and among the cofactors (through fluorescence measurements). The RC aggregation taking place at high temperature has been investigated by means of dynamic light scattering. Two experimental protocols have been used: (i) isothermal kinetics, in which the time evolution of RC after a sudden increase of the temperature is probed, and (ii) T-scans, in which the RCs are heated at constant rate. The analysis of the results coming from both the experiments indicates that the minimal kinetic scheme requires an equilibrium step and an irreversible process. The irreversible step is characterized by a activation energy of 205+/-14 kJ/mol and is independent from the detergent concentration. Since the temperature dependence of the aggregation rate was found to obey to the same law, the aggregation process is unfolding-limited. On the other hand, the equilibrium process between the native and a partially unfolded conformations was found to be strongly dependent on the detergent concentration. Increasing the LDAO content from 0.025 to 0.5 wt.% decreases the melting temperature from 49 to 42 degrees C. This corresponds to a sizeable (22 kJ/mol at 25 degrees C) destabilization of the native conformation induced by the detergent. The nature of the aggregates formed by the denatured RCs depends on the temperature. For temperature below 60 degrees C compact aggregates are formed while at 60 degrees C the clusters are less dense with a scaling relation between mass and size close to that expected for diffusion-limited aggregation. The aggregate final sizes formed at different temperatures indicate the presence of an even number of proteins suggesting that these clusters are formed by aggregation of dimers.

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Year:  2009        PMID: 19786126     DOI: 10.1016/j.bbapap.2009.09.021

Source DB:  PubMed          Journal:  Biochim Biophys Acta        ISSN: 0006-3002


  9 in total

1.  Effects of the measuring light on the photochemistry of the bacterial photosynthetic reaction center from Rhodobacter sphaeroides.

Authors:  Ivan Husu; Mauro Giustini; Giuseppe Colafemmina; Gerardo Palazzo; Antonia Mallardi
Journal:  Photosynth Res       Date:  2011-07-23       Impact factor: 3.573

2.  Rapid exploration of the folding topology of helical membrane proteins using paramagnetic perturbation.

Authors:  Kwon Joo Yeo; Hye-Yeon Kim; Young Pil Kim; Eunha Hwang; Myung Hee Kim; Chaejoon Cheong; Senyon Choe; Young Ho Jeon
Journal:  Protein Sci       Date:  2010-11-11       Impact factor: 6.725

3.  Following Natures Lead: On the Construction of Membrane-Inserted Toxins in Lipid Bilayer Nanodiscs.

Authors:  Narahari Akkaladevi; Srayanta Mukherjee; Hiroo Katayama; Blythe Janowiak; Deepa Patel; Edward P Gogol; Bradley L Pentelute; R John Collier; Mark T Fisher
Journal:  J Membr Biol       Date:  2015-01-13       Impact factor: 1.843

4.  Visualizing a protein quake with time-resolved X-ray scattering at a free-electron laser.

Authors:  David Arnlund; Linda C Johansson; Cecilia Wickstrand; Anton Barty; Garth J Williams; Erik Malmerberg; Jan Davidsson; Despina Milathianaki; Daniel P DePonte; Robert L Shoeman; Dingjie Wang; Daniel James; Gergely Katona; Sebastian Westenhoff; Thomas A White; Andrew Aquila; Sadia Bari; Peter Berntsen; Mike Bogan; Tim Brandt van Driel; R Bruce Doak; Kasper Skov Kjær; Matthias Frank; Raimund Fromme; Ingo Grotjohann; Robert Henning; Mark S Hunter; Richard A Kirian; Irina Kosheleva; Christopher Kupitz; Mengning Liang; Andrew V Martin; Martin Meedom Nielsen; Marc Messerschmidt; M Marvin Seibert; Jennie Sjöhamn; Francesco Stellato; Uwe Weierstall; Nadia A Zatsepin; John C H Spence; Petra Fromme; Ilme Schlichting; Sébastien Boutet; Gerrit Groenhof; Henry N Chapman; Richard Neutze
Journal:  Nat Methods       Date:  2014-08-10       Impact factor: 28.547

5.  Slow dissociation of a charged ligand: analysis of the primary quinone Q(A) site of photosynthetic bacterial reaction centers.

Authors:  Jennifer Madeo; Maja Mihajlovic; Themis Lazaridis; M R Gunner
Journal:  J Am Chem Soc       Date:  2011-10-11       Impact factor: 15.419

6.  Asymmetric Cryo-EM Structure of Anthrax Toxin Protective Antigen Pore with Lethal Factor N-Terminal Domain.

Authors:  Alexandra J Machen; Narahari Akkaladevi; Caleb Trecazzi; Pierce T O'Neil; Srayanta Mukherjee; Yifei Qi; Rebecca Dillard; Wonpil Im; Edward P Gogol; Tommi A White; Mark T Fisher
Journal:  Toxins (Basel)       Date:  2017-09-22       Impact factor: 4.546

7.  Temperature dependence of photosynthetic reaction centre activity in Rhodospirillum rubrum.

Authors:  David Kaftan; David Bína; Michal Koblížek
Journal:  Photosynth Res       Date:  2019-07-02       Impact factor: 3.573

8.  Influence of protein-micelle ratios and cysteine residues on the kinetic stability and unfolding rates of human mitochondrial VDAC-2.

Authors:  Svetlana Rajkumar Maurya; Radhakrishnan Mahalakshmi
Journal:  PLoS One       Date:  2014-01-29       Impact factor: 3.240

9.  Bacterial reaction centers purified with styrene maleic acid copolymer retain native membrane functional properties and display enhanced stability.

Authors:  David J K Swainsbury; Stefan Scheidelaar; Rienk van Grondelle; J Antoinette Killian; Michael R Jones
Journal:  Angew Chem Int Ed Engl       Date:  2014-09-11       Impact factor: 15.336

  9 in total

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