Literature DB >> 19785413

DOTA-M8: An extremely rigid, high-affinity lanthanide chelating tag for PCS NMR spectroscopy.

Daniel Häussinger1, Jie-rong Huang, Stephan Grzesiek.   

Abstract

A new lanthanide chelating tag (M8) for paramagnetic labeling of biomolecules is presented, which is based on an eight-fold, stereoselectively methyl-substituted DOTA that can be covalently linked to the host molecule by a single disulfide bond. The steric overcrowding of the DOTA scaffold leads to an extremely rigid, kinetically and chemically inert lanthanide chelator. Its steric bulk restricts the motion of the tag relative to the host molecule. These properties result in very large pseudocontact shifts (>5 ppm) and residual dipolar couplings (>20 Hz) for Dy-M8 linked to ubiquitin, which are unprecedented for a small, single-point-attachment tag. Such large pseudocontact shifts should be well detectable even for larger proteins and distances beyond approximately 50 A. Due to its exceptionally high stability and lanthanide affinity M8 can be used under extreme chemical or physical conditions, such as those applied for protein denaturation, or when it is undesirable that buffer or protein react with excess lanthanide ions.

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Year:  2009        PMID: 19785413     DOI: 10.1021/ja903233w

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  47 in total

1.  Strategies for the preparation of bifunctional gadolinium(III) chelators.

Authors:  Luca Frullano; Peter Caravan
Journal:  Curr Org Synth       Date:  2011-08-01       Impact factor: 1.975

2.  MaxOcc: a web portal for maximum occurrence analysis.

Authors:  Ivano Bertini; Lucio Ferella; Claudio Luchinat; Giacomo Parigi; Maxim V Petoukhov; Enrico Ravera; Antonio Rosato; Dmitri I Svergun
Journal:  J Biomol NMR       Date:  2012-05-26       Impact factor: 2.835

3.  Engineering encodable lanthanide-binding tags into loop regions of proteins.

Authors:  Katja Barthelmes; Anne M Reynolds; Ezra Peisach; Hendrik R A Jonker; Nicholas J DeNunzio; Karen N Allen; Barbara Imperiali; Harald Schwalbe
Journal:  J Am Chem Soc       Date:  2011-02-02       Impact factor: 15.419

4.  A new carbamidemethyl-linked lanthanoid chelating tag for PCS NMR spectroscopy of proteins in living HeLa cells.

Authors:  Yuya Hikone; Go Hirai; Masaki Mishima; Kohsuke Inomata; Teppei Ikeya; Souichiro Arai; Masahiro Shirakawa; Mikiko Sodeoka; Yutaka Ito
Journal:  J Biomol NMR       Date:  2016-09-08       Impact factor: 2.835

5.  Information content of long-range NMR data for the characterization of conformational heterogeneity.

Authors:  Witold Andrałojć; Konstantin Berlin; David Fushman; Claudio Luchinat; Giacomo Parigi; Enrico Ravera; Luca Sgheri
Journal:  J Biomol NMR       Date:  2015-06-05       Impact factor: 2.835

6.  Protein structural studies by paramagnetic solid-state NMR spectroscopy aided by a compact cyclen-type Cu(II) binding tag.

Authors:  Ishita Sengupta; Min Gao; Rajith J Arachchige; Philippe S Nadaud; Timothy F Cunningham; Sunil Saxena; Charles D Schwieters; Christopher P Jaroniec
Journal:  J Biomol NMR       Date:  2014-11-29       Impact factor: 2.835

7.  FANTEN: a new web-based interface for the analysis of magnetic anisotropy-induced NMR data.

Authors:  Mauro Rinaldelli; Azzurra Carlon; Enrico Ravera; Giacomo Parigi; Claudio Luchinat
Journal:  J Biomol NMR       Date:  2014-11-22       Impact factor: 2.835

8.  A minor conformation of a lanthanide tag on adenylate kinase characterized by paramagnetic relaxation dispersion NMR spectroscopy.

Authors:  Mathias A S Hass; Wei-Min Liu; Roman V Agafonov; Renee Otten; Lien A Phung; Jesika T Schilder; Dorothee Kern; Marcellus Ubbink
Journal:  J Biomol NMR       Date:  2015-01-08       Impact factor: 2.835

9.  Long-Range RNA Structural Information via a Paramagnetically Tagged Reporter Protein.

Authors:  Madeleine Strickland; Jonathan Catazaro; Rohith Rajasekaran; Marie-Paule Strub; Colin O'Hern; Guillermo A Bermejo; Michael F Summers; Jan Marchant; Nico Tjandra
Journal:  J Am Chem Soc       Date:  2019-01-22       Impact factor: 15.419

10.  Structure determination of the seven-helix transmembrane receptor sensory rhodopsin II by solution NMR spectroscopy.

Authors:  Antoine Gautier; Helen R Mott; Mark J Bostock; John P Kirkpatrick; Daniel Nietlispach
Journal:  Nat Struct Mol Biol       Date:  2010-05-30       Impact factor: 15.369

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