Literature DB >> 19783642

A real-time fluorogenic assay for the visualization of glycoside hydrolase activity in planta.

Farid M Ibatullin1, Alicja Banasiak, Martin J Baumann, Lionel Greffe, Junko Takahashi, Ewa J Mellerowicz, Harry Brumer.   

Abstract

There currently exists a diverse array of molecular probes for the in situ localization of polysaccharides, nucleic acids, and proteins in plant cells, including reporter enzyme strategies (e.g. protein-glucuronidase fusions). In contrast, however, there is a paucity of methods for the direct analysis of endogenous glycoside hydrolases and transglycosidases responsible for cell wall remodeling. To exemplify the potential of fluorogenic resorufin glycosides to address this issue, a resorufin beta-glycoside of a xylogluco-oligosaccharide (XXXG-beta-Res) was synthesized as a specific substrate for in planta analysis of XEH activity. The resorufin aglycone is particularly distinguished for high sensitivity in muro assays due to a low pK(a) (5.8) and large extinction coefficient (epsilon 62,000 M(-1) cm(-1)), long-wavelength fluorescence (excitation 571 nm/emission 585 nm), and high quantum yield (0.74) of the corresponding anion. In vitro analyses demonstrated that XXXG-beta-Res is hydrolyzed by the archetypal plant XEH, nasturtium (Tropaeolum majus) NXG1, with classical Michaelis-Menten substrate saturation kinetics and a linear dependence on both enzyme concentration and incubation time. Further, XEH activity could be visualized in real time by observing the localized increase in fluorescence in germinating nasturtium seeds and Arabidopsis (Arabidopsis thaliana) inflorescent stems by confocal microscopy. Importantly, this new in situ XEH assay provides an essential complement to the in situ xyloglucan endotransglycosylase assay, thus allowing delineation of the disparate activities encoded by xyloglucan endotransglycosylase/hydrolase genes directly in plant tissues. The observation that XXXG-beta-Res is also hydrolyzed by diverse microbial XEHs indicates that this substrate, and resorufin glycosides in general, may find broad applicability for the analysis of wall restructuring by polysaccharide hydrolases during morphogenesis and plant-microbe interactions.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19783642      PMCID: PMC2785991          DOI: 10.1104/pp.109.147439

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  47 in total

1.  Enhancement of growth by expression of poplar cellulase in Arabidopsis thaliana.

Authors:  Yong Woo Park; Rumi Tominaga; Junji Sugiyama; Yuzo Furuta; Eiichi Tanimoto; Masahiro Samejima; Fukumi Sakai; Takahisa Hayashi
Journal:  Plant J       Date:  2003-03       Impact factor: 6.417

Review 2.  The XTH family of enzymes involved in xyloglucan endotransglucosylation and endohydrolysis: current perspectives and a new unifying nomenclature.

Authors:  Jocelyn K C Rose; Janet Braam; Stephen C Fry; Kazuhiko Nishitani
Journal:  Plant Cell Physiol       Date:  2002-12       Impact factor: 4.927

Review 3.  GFP technology for live cell imaging.

Authors:  David Ehrhardt
Journal:  Curr Opin Plant Biol       Date:  2003-12       Impact factor: 7.834

4.  The excited-state interaction of resazurin and resorufin with amines in aqueous solutions. Photophysics and photochemical reactions.

Authors:  C Bueno; M L Villegas; S G Bertolotti; C M Previtali; M G Neumann; M V Encinas
Journal:  Photochem Photobiol       Date:  2002-10       Impact factor: 3.421

5.  A single-cell assay of beta-galactosidase activity in Saccharomyces cerevisiae.

Authors:  K D Wittrup; J E Bailey
Journal:  Cytometry       Date:  1988-07

6.  KORRIGAN1 and its aspen homolog PttCel9A1 decrease cellulose crystallinity in Arabidopsis stems.

Authors:  Junko Takahashi; Ulla J Rudsander; Mattias Hedenström; Alicja Banasiak; Jesper Harholt; Nicolas Amelot; Peter Immerzeel; Peter Ryden; Satoshi Endo; Farid M Ibatullin; Harry Brumer; Elena del Campillo; Emma R Master; Henrik Vibe Scheller; Björn Sundberg; Tuula T Teeri; Ewa J Mellerowicz
Journal:  Plant Cell Physiol       Date:  2009-04-27       Impact factor: 4.927

7.  Structural analysis of tamarind seed xyloglucan oligosaccharides using beta-galactosidase digestion and spectroscopic methods.

Authors:  W S York; L K Harvey; R Guillen; P Albersheim; A G Darvill
Journal:  Carbohydr Res       Date:  1993-10-04       Impact factor: 2.104

8.  Crystal structures of a poplar xyloglucan endotransglycosylase reveal details of transglycosylation acceptor binding.

Authors:  Patrik Johansson; Harry Brumer; Martin J Baumann; Asa M Kallas; Hongbin Henriksson; Stuart E Denman; Tuula T Teeri; T Alwyn Jones
Journal:  Plant Cell       Date:  2004-03-12       Impact factor: 11.277

9.  Purification and properties of a novel xyloglucan-specific endo-(1----4)-beta-D-glucanase from germinated nasturtium seeds (Tropaeolum majus L.).

Authors:  M Edwards; I C Dea; P V Bulpin; J S Reid
Journal:  J Biol Chem       Date:  1986-07-15       Impact factor: 5.157

10.  GUS fusions: beta-glucuronidase as a sensitive and versatile gene fusion marker in higher plants.

Authors:  R A Jefferson; T A Kavanagh; M W Bevan
Journal:  EMBO J       Date:  1987-12-20       Impact factor: 11.598

View more
  13 in total

1.  The XTH gene family: an update on enzyme structure, function, and phylogeny in xyloglucan remodeling.

Authors:  Jens M Eklöf; Harry Brumer
Journal:  Plant Physiol       Date:  2010-04-26       Impact factor: 8.340

2.  Spatial-temporal analysis of polyethylene glycol-reduced aluminium accumulation and xyloglucan endotransglucosylase action in root tips of common bean (Phaseolus vulgaris).

Authors:  Maolin Zhang; Yanqi Ma; Walter J Horst; Zhong-Bao Yang
Journal:  Ann Bot       Date:  2016-04-22       Impact factor: 4.357

3.  Aspen Tension Wood Fibers Contain β-(1---> 4)-Galactans and Acidic Arabinogalactans Retained by Cellulose Microfibrils in Gelatinous Walls.

Authors:  Tatyana Gorshkova; Natalia Mokshina; Tatyana Chernova; Nadezhda Ibragimova; Vadim Salnikov; Polina Mikshina; Theodora Tryfona; Alicja Banasiak; Peter Immerzeel; Paul Dupree; Ewa J Mellerowicz
Journal:  Plant Physiol       Date:  2015-09-16       Impact factor: 8.340

4.  Lack of α-xylosidase activity in Arabidopsis alters xyloglucan composition and results in growth defects.

Authors:  Javier Sampedro; Brenda Pardo; Cristina Gianzo; Esteban Guitián; Gloria Revilla; Ignacio Zarra
Journal:  Plant Physiol       Date:  2010-08-26       Impact factor: 8.340

5.  Quantifying Carbohydrate-Active Enzyme Activity with Glycoprotein Substrates Using Electrospray Ionization Mass Spectrometry and Center-of-Mass Monitoring.

Authors:  Zhixiong Li; Pavel I Kitov; Elena N Kitova; Duong T Bui; Kelley W Moremen; Warren W Wakarchuk; Lara K Mahal; Matthew S Macauley; John S Klassen
Journal:  Anal Chem       Date:  2021-11-09       Impact factor: 6.986

6.  Group III-A XTH genes of Arabidopsis encode predominant xyloglucan endohydrolases that are dispensable for normal growth.

Authors:  Nomchit Kaewthai; Delphine Gendre; Jens M Eklöf; Farid M Ibatullin; Ines Ezcurra; Rishikesh P Bhalerao; Harry Brumer
Journal:  Plant Physiol       Date:  2012-10-25       Impact factor: 8.340

Review 7.  Fluorescently labelled glycans and their applications.

Authors:  Hongbin Yan; Ravi Shekar Yalagala; Fengyang Yan
Journal:  Glycoconj J       Date:  2015-08-04       Impact factor: 2.916

8.  Engineering the acceptor substrate specificity in the xyloglucan endotransglycosylase TmXET6.3 from nasturtium seeds (Tropaeolum majus L.).

Authors:  Barbora Stratilová; Zuzana Firáková; Jaroslav Klaudiny; Sergej Šesták; Stanislav Kozmon; Dana Strouhalová; Soňa Garajová; Fairouz Ait-Mohand; Ágnes Horváthová; Vladimír Farkaš; Eva Stratilová; Maria Hrmova
Journal:  Plant Mol Biol       Date:  2019-03-13       Impact factor: 4.076

9.  Fluorescent tags to explore cell wall structure and dynamics.

Authors:  Martine Gonneau; Herman Höfte; Samantha Vernhettes
Journal:  Front Plant Sci       Date:  2012-07-03       Impact factor: 5.753

10.  Global identification of multiple OsGH9 family members and their involvement in cellulose crystallinity modification in rice.

Authors:  Guosheng Xie; Bo Yang; Zhengdan Xu; Fengcheng Li; Kai Guo; Mingliang Zhang; Lingqiang Wang; Weihua Zou; Yanting Wang; Liangcai Peng
Journal:  PLoS One       Date:  2013-01-04       Impact factor: 3.240

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.