Literature DB >> 19783274

Evaluation of multiple sewage-associated Bacteroides PCR markers for sewage pollution tracking.

W Ahmed1, A Goonetilleke, D Powell, T Gardner.   

Abstract

The host specificity of the five published sewage-associated Bacteroides markers (i.e., HF183, BacHum, HuBac, BacH and Human-Bac) was evaluated in Southeast Queensland, Australia by testing fecal DNA samples (n=186) from 11 animal species including human fecal samples collected via influent to a sewage treatment plant (STP). All human fecal samples (n=50) were positive for all five markers indicating 100% sensitivity of these markers. The overall specificity of the HF183 markers to differentiate between humans and animals was 99%. The specificities of the BacHum and BacH markers were>94%, suggesting that these markers are suitable for the detection of sewage pollution in environmental waters in Australia. The HuBac (i.e., 63%) and Human-Bac (i.e., 79% specificity) markers performed poorly in distinguishing between the sources of human and animal fecal samples. It is recommended that the specificity of the sewage-associated markers must be rigorously tested prior to its application to identify the sources of fecal pollution in environmental waters.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19783274     DOI: 10.1016/j.watres.2009.08.042

Source DB:  PubMed          Journal:  Water Res        ISSN: 0043-1354            Impact factor:   11.236


  15 in total

1.  Highly discriminatory single-nucleotide polymorphism interrogation of Escherichia coli by use of allele-specific real-time PCR and eBURST analysis.

Authors:  Maxim S Sheludchenko; Flavia Huygens; Megan H Hargreaves
Journal:  Appl Environ Microbiol       Date:  2010-05-07       Impact factor: 4.792

2.  Blautia and Prevotella sequences distinguish human and animal fecal pollution in Brazil surface waters.

Authors:  Amber M Koskey; Jenny C Fisher; A Murat Eren; Rafael Ponce-Terashima; Mitermayer G Reis; Ronald E Blanton; Sandra L McLellan
Journal:  Environ Microbiol Rep       Date:  2014-07-09       Impact factor: 3.541

3.  Comparison of the host specificities of two bacteroidales quantitative PCR assays used for tracking human fecal contamination.

Authors:  Laurie C Van De Werfhorst; Bram Sercu; Patricia A Holden
Journal:  Appl Environ Microbiol       Date:  2011-07-08       Impact factor: 4.792

4.  Microbial community analysis and identification of alternative host-specific fecal indicators in fecal and river water samples using pyrosequencing.

Authors:  Ju-Yong Jeong; Hee-Deung Park; Kyong-Hee Lee; Hang-Yeon Weon; Jong-Ok Ka
Journal:  J Microbiol       Date:  2011-09-02       Impact factor: 3.422

5.  Presence of microbial and chemical source tracking markers in roof-harvested rainwater and catchment systems for the detection of fecal contamination.

Authors:  M Waso; T Ndlovu; P H Dobrowsky; S Khan; W Khan
Journal:  Environ Sci Pollut Res Int       Date:  2016-05-20       Impact factor: 4.223

6.  Microbial quality of tropical inland waters and effects of rainfall events.

Authors:  Tasha M Santiago-Rodriguez; Raymond L Tremblay; Carlos Toledo-Hernandez; Joel E Gonzalez-Nieves; Hodon Ryu; Jorge W Santo Domingo; Gary A Toranzos
Journal:  Appl Environ Microbiol       Date:  2012-05-18       Impact factor: 4.792

7.  Persistence of Bacteroides species populations in a river as measured by molecular and culture techniques.

Authors:  Elisenda Ballesté; Anicet R Blanch
Journal:  Appl Environ Microbiol       Date:  2010-09-17       Impact factor: 4.792

Review 8.  Discovering new indicators of fecal pollution.

Authors:  Sandra L McLellan; A Murat Eren
Journal:  Trends Microbiol       Date:  2014-09-05       Impact factor: 17.079

9.  Evaluation of five microbial and four mitochondrial DNA markers for tracking human and pig fecal pollution in freshwater.

Authors:  Xiwei He; Peng Liu; Guolu Zheng; Huimei Chen; Wei Shi; Yibin Cui; Hongqiang Ren; Xu-Xiang Zhang
Journal:  Sci Rep       Date:  2016-10-13       Impact factor: 4.379

10.  Performance characteristics of qPCR assays targeting human- and ruminant-associated bacteroidetes for microbial source tracking across sixteen countries on six continents.

Authors:  Georg H Reischer; James E Ebdon; Johanna M Bauer; Nathalie Schuster; Warish Ahmed; Johan Aström; Anicet R Blanch; Günter Blöschl; Denis Byamukama; Tricia Coakley; Christobel Ferguson; Goraw Goshu; Gwangpyo Ko; Ana Maria de Roda Husman; Douglas Mushi; Ramiro Poma; Bandana Pradhan; Veronica Rajal; Margit A Schade; Regina Sommer; Huw Taylor; Erika M Toth; Virgil Vrajmasu; Stefan Wuertz; Robert L Mach; Andreas H Farnleitner
Journal:  Environ Sci Technol       Date:  2013-07-10       Impact factor: 9.028

View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.