Literature DB >> 19779740

Molecular characterization of Trichomonas vaginalis isolates from the Philippines.

Windell L Rivera1, Vanissa A Ong, Marvin C Masalunga.   

Abstract

Trichomonas vaginalis is a human urogenital pathogen that causes trichomoniasis, the most common nonviral parasitic sexually transmitted infection in the world. Presently, there are no reports on comparative sequence analysis as well as on the identification of phylogenetic positions of T. vaginalis isolates from the Philippines relative to known trichomonads. In this study, 5.8S rDNA and the flanking internal transcribed spacer (ITS) regions of 57 T. vaginalis isolates were sequenced. The phylogenetic positions of the isolates relative to known trichomonads were determined using the model-based (GTR+Gamma+I) neighbor-joining, maximum likelihood, and Bayesian-inference analyses and the nonmodel-based maximum parsimony analysis. Construction of a phylogenetic tree showed the clustering of all the sequences in one branch together with other T. vaginalis strains obtained through basic local alignment search tool search. Sequencing of the 5.8S rDNA gene and the flanking ITS1and ITS2 regions of T. vaginalis isolates from the Philippines demonstrated low genetic polymorphism. However, comparison of the ribosomal DNA sequences may have implications on some phenotypic characteristics of T. vaginalis.

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Year:  2009        PMID: 19779740     DOI: 10.1007/s00436-009-1635-2

Source DB:  PubMed          Journal:  Parasitol Res        ISSN: 0932-0113            Impact factor:   2.289


  16 in total

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Authors:  Z Zhang; S Schwartz; L Wagner; W Miller
Journal:  J Comput Biol       Date:  2000 Feb-Apr       Impact factor: 1.479

3.  MrBayes 3: Bayesian phylogenetic inference under mixed models.

Authors:  Fredrik Ronquist; John P Huelsenbeck
Journal:  Bioinformatics       Date:  2003-08-12       Impact factor: 6.937

4.  Methods for detection of Trichomonas vaginalis in the male partners of infected women: implications for control of trichomoniasis.

Authors:  Marcia M Hobbs; Dana M Lapple; Lisa F Lawing; Jane R Schwebke; Myron S Cohen; Heidi Swygard; Julius Atashili; Peter A Leone; William C Miller; Arlene C Seña
Journal:  J Clin Microbiol       Date:  2006-09-13       Impact factor: 5.948

5.  Comparative sequence analysis of 5.8S rRNA genes and internal transcribed spacer (ITS) regions of trichomonadid protozoa.

Authors:  R S Felleisen
Journal:  Parasitology       Date:  1997-08       Impact factor: 3.234

6.  Viability of Trichomonas vaginalis in urine: epidemiologic and clinical implications.

Authors:  Shira C Shafir; Frank J Sorvillo
Journal:  J Clin Microbiol       Date:  2006-08-23       Impact factor: 5.948

7.  Comparison of the 5.8S rRNA gene and internal transcribed spacer regions of trichomonadid protozoa recovered from the bovine preputial cavity.

Authors:  R L Walker; D C Hayes; S J Sawyer; R W Nordhausen; K A Van Hoosear; R H BonDurant
Journal:  J Vet Diagn Invest       Date:  2003-01       Impact factor: 1.279

8.  PHYML Online--a web server for fast maximum likelihood-based phylogenetic inference.

Authors:  Stéphane Guindon; Franck Lethiec; Patrice Duroux; Olivier Gascuel
Journal:  Nucleic Acids Res       Date:  2005-07-01       Impact factor: 16.971

9.  Concordance between genetic relatedness and phenotypic similarities of Trichomonas vaginalis strains.

Authors:  V Hampl; S Vanácová; J Kulda; J Flegr
Journal:  BMC Evol Biol       Date:  2001-11-15       Impact factor: 3.260

10.  Database indexing for production MegaBLAST searches.

Authors:  Aleksandr Morgulis; George Coulouris; Yan Raytselis; Thomas L Madden; Richa Agarwala; Alejandro A Schäffer
Journal:  Bioinformatics       Date:  2008-06-21       Impact factor: 6.937

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  7 in total

1.  Identification of astigmatid mites using ITS2 and COI regions.

Authors:  Bin Yang; Junlong Cai; Xunjia Cheng
Journal:  Parasitol Res       Date:  2010-11-12       Impact factor: 2.289

2.  Molecular characterization of Trichomonas infections in women of Ilam City, southwestern Iran.

Authors:  Maryam Alikhani; Mohammad Akhoundi; Denis Sereno; Jahangir Abdi; Razi Naserifar; Mohammad Reza Mahmoudi; Asad Mirzaei
Journal:  Parasitol Res       Date:  2022-03-25       Impact factor: 2.289

3.  Gene Diversity of Trichomonas vaginalis Isolates.

Authors:  Z Valadkhani; F Kazemi; N Hassan; Z Aghighi; I Esmaili; M Talebi
Journal:  Iran J Parasitol       Date:  2011-08       Impact factor: 1.012

4.  Genetic Identification of Trichomonas vaginalis by Using the Actin Gene and Molecular Based Methods.

Authors:  Mohammad Matini; Sassan Rezaie; Mahdi Mohebali; Amir-Hossein Maghsood; Soghra Rabiee; Mohammad Fallah; Mostafa Rezaeian
Journal:  Iran J Parasitol       Date:  2014-09       Impact factor: 1.012

5.  Multilocus sequence typing of Trichomonas vaginalis clinical samples from Amsterdam, the Netherlands.

Authors:  C van der Veer; M Himschoot; S M Bruisten
Journal:  BMJ Open       Date:  2016-10-13       Impact factor: 2.692

6.  New Hosts of Simplicimonas similis and Trichomitus batrachorum Identified by 18S Ribosomal RNA Gene Sequences.

Authors:  Kris Genelyn B Dimasuay; Orlie John Y Lavilla; Windell L Rivera
Journal:  J Parasitol Res       Date:  2013-07-10

7.  Considerable Genetic Diversity of Trichomonas vaginalis Clinical Isolates in a Targeted Population in South of Iran.

Authors:  Razieh Tavakoli Oliaee; Zahra Babaei; Gholam Reza Hatam; Amir Tavakoli Kareshk; Hosein Mahmoudvand; Arghavan Vafafar; Naser Ziaali
Journal:  Iran J Parasitol       Date:  2017 Apr-Jun       Impact factor: 1.012

  7 in total

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