Literature DB >> 19777599

Analysis of exposed cellulose surfaces in pretreated wood biomass using carbohydrate-binding module (CBM)-cyan fluorescent protein (CFP).

Takeshi Kawakubo1, Shuichi Karita, Yuko Araki, Shota Watanabe, Masafumi Oyadomari, Rie Takada, Fumio Tanaka, Kentaro Abe, Takahito Watanabe, Yoichi Honda, Takashi Watanabe.   

Abstract

In enzymatic saccharification of lignocellulosics, the access of the enzymes to exposed cellulose surfaces is a key initial step in triggering hydrolysis. However, knowledge of the structure-hydrolyzability relationship of the pretreated biomass is still limited. Here we used fluorescent-labeled recombinant carbohydrate-binding modules (CBMs) from Clostridium josui as specific markers for crystalline cellulose (CjCBM3) and non-crystalline cellulose (CjCBM28) to analyze the complex surfaces of wood tissues pretreated with NaOH, NaOH-Na(2)S (kraft pulping), hydrothermolysis, ball-milling, and organosolvolysis. Japanese cedar wood, one of the most recalcitrant softwood species was selected for the analysis. The binding analysis clarified the linear dependency of the exposure of crystalline and non-crystalline cellulose surfaces for enzymatic saccharification yield by the organosolv and kraft delignification processes. Ball-milling for 5-30 min increased saccharification yield up to 77%, but adsorption by the CjCBM-cyan fluorescent proteins (CFPs) was below 5%. Adsorption of CjCBM-CFPs on the hydrothermolysis pulp were less than half of those for organosolvolysis pulp, in coincidence with low saccharification yields. For all the pretreated wood, crystallinity index was not directly correlated with the overall saccharification yield. Fluorescent microscopy revealed that CjCBM3-CFP and CjCBM28-CFP were site-specifically adsorbed on external fibrous structures and ruptured or distorted fiber surfaces. The assay system with CBM-CFPs is a powerful measure to estimate the initiation sites of hydrolysis and saccharification yields from chemically delignified wood pulps. 2009 Wiley Periodicals, Inc.

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Year:  2010        PMID: 19777599     DOI: 10.1002/bit.22550

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  10 in total

1.  Nanostructure of cellulose microfibrils in spruce wood.

Authors:  Anwesha N Fernandes; Lynne H Thomas; Clemens M Altaner; Philip Callow; V Trevor Forsyth; David C Apperley; Craig J Kennedy; Michael C Jarvis
Journal:  Proc Natl Acad Sci U S A       Date:  2011-11-07       Impact factor: 11.205

2.  Role of supramolecular cellulose structures in enzymatic hydrolysis of plant cell walls.

Authors:  Lisbeth Garbrecht Thygesen; Budi Juliman Hidayat; Katja Salomon Johansen; Claus Felby
Journal:  J Ind Microbiol Biotechnol       Date:  2010-09-18       Impact factor: 3.346

3.  The use of carbohydrate binding modules (CBMs) to monitor changes in fragmentation and cellulose fiber surface morphology during cellulase- and Swollenin-induced deconstruction of lignocellulosic substrates.

Authors:  Keith Gourlay; Jinguang Hu; Valdeir Arantes; Merja Penttilä; Jack N Saddler
Journal:  J Biol Chem       Date:  2014-12-19       Impact factor: 5.157

4.  The binding of cellulase variants to dislocations: a semi-quantitative analysis based on CLSM (confocal laser scanning microscopy) images.

Authors:  Budi J Hidayat; Carmen Weisskopf; Claus Felby; Katja S Johansen; Lisbeth G Thygesen
Journal:  AMB Express       Date:  2015-12-01       Impact factor: 3.298

5.  Mapping out the structural changes of natural and pretreated plant cell wall surfaces by atomic force microscopy single molecular recognition imaging.

Authors:  Mengmeng Zhang; Guojun Chen; Rajeev Kumar; Bingqian Xu
Journal:  Biotechnol Biofuels       Date:  2013-10-11       Impact factor: 6.040

6.  Specific tracking of xylan using fluorescent-tagged carbohydrate-binding module 15 as molecular probe.

Authors:  Vinay Khatri; Yannick Hébert-Ouellet; Fatma Meddeb-Mouelhi; Marc Beauregard
Journal:  Biotechnol Biofuels       Date:  2016-03-25       Impact factor: 6.040

7.  Determination of optimal biomass pretreatment strategies for biofuel production: investigation of relationships between surface-exposed polysaccharides and their enzymatic conversion using carbohydrate-binding modules.

Authors:  Vinay Khatri; Fatma Meddeb-Mouelhi; Kokou Adjallé; Simon Barnabé; Marc Beauregard
Journal:  Biotechnol Biofuels       Date:  2018-05-18       Impact factor: 6.040

8.  Quantifying cellulose accessibility during enzyme-mediated deconstruction using 2 fluorescence-tagged carbohydrate-binding modules.

Authors:  Vera Novy; Kevin Aïssa; Fredrik Nielsen; Suzana K Straus; Peter Ciesielski; Christopher G Hunt; Jack Saddler
Journal:  Proc Natl Acad Sci U S A       Date:  2019-10-21       Impact factor: 11.205

9.  Fluorescent Nano-Probes to Image Plant Cell Walls by Super-Resolution STED Microscopy.

Authors:  Gabriel Paës; Anouck Habrant; Christine Terryn
Journal:  Plants (Basel)       Date:  2018-02-06

Review 10.  Report on the Current Inventory of the Toolbox for Plant Cell Wall Analysis: Proteinaceous and Small Molecular Probes.

Authors:  Maja G Rydahl; Aleksander R Hansen; Stjepan K Kračun; Jozef Mravec
Journal:  Front Plant Sci       Date:  2018-05-03       Impact factor: 5.753

  10 in total

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