Literature DB >> 19767436

Complete genome sequence of Lactobacillus johnsonii FI9785, a competitive exclusion agent against pathogens in poultry.

Udo Wegmann1, Karin Overweg, Nikki Horn, Alexander Goesmann, Arjan Narbad, Michael J Gasson, Claire Shearman.   

Abstract

Lactobacillus johnsonii is a member of the acidophilus group of lactobacilli. Because of their probiotic properties, including attachment to epithelial cells, immunomodulation, and competitive exclusion of pathogens, representatives of this group are being intensively studied. Here we report the complete annotated genome sequence of Lactobacillus johnsonii FI9785, a strain which prevents the colonization of specific-pathogen-free chicks by Clostridium perfringens.

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Year:  2009        PMID： 19767436      PMCID： PMC2772503          DOI： 10.1128/JB.01182-09

Source DB:  PubMed          Journal:  J Bacteriol        ISSN： 0021-9193            Impact factor:   3.490


  15 in total

1.  Predicting transmembrane protein topology with a hidden Markov model: application to complete genomes.

Authors:  A Krogh; B Larsson; G von Heijne; E L Sonnhammer
Journal:  J Mol Biol       Date:  2001-01-19       Impact factor: 5.469

2.  The Staden package, 1998.

Authors:  R Staden; K F Beal; J K Bonfield
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3.  A probabilistic method for identifying start codons in bacterial genomes.

Authors:  B E Suzek; M D Ermolaeva; M Schreiber; S L Salzberg
Journal:  Bioinformatics       Date:  2001-12       Impact factor: 6.937

4.  GenDB--an open source genome annotation system for prokaryote genomes.

Authors:  Folker Meyer; Alexander Goesmann; Alice C McHardy; Daniela Bartels; Thomas Bekel; Jörn Clausen; Jörn Kalinowski; Burkhard Linke; Oliver Rupp; Robert Giegerich; Alfred Pühler
Journal:  Nucleic Acids Res       Date:  2003-04-15       Impact factor: 16.971

5.  Improved prediction of signal peptides: SignalP 3.0.

Authors:  Jannick Dyrløv Bendtsen; Henrik Nielsen; Gunnar von Heijne; Søren Brunak
Journal:  J Mol Biol       Date:  2004-07-16       Impact factor: 5.469

6.  Development of joint application strategies for two microbial gene finders.

Authors:  Alice C McHardy; Alexander Goesmann; Alfred Pühler; Folker Meyer
Journal:  Bioinformatics       Date:  2004-02-26       Impact factor: 6.937

7.  tRNAscan-SE: a program for improved detection of transfer RNA genes in genomic sequence.

Authors:  T M Lowe; S R Eddy
Journal:  Nucleic Acids Res       Date:  1997-03-01       Impact factor: 16.971

Review 8.  Gapped BLAST and PSI-BLAST: a new generation of protein database search programs.

Authors:  S F Altschul; T L Madden; A A Schäffer; J Zhang; Z Zhang; W Miller; D J Lipman
Journal:  Nucleic Acids Res       Date:  1997-09-01       Impact factor: 16.971

9.  In vivo characterization of Lactobacillus johnsonii FI9785 for use as a defined competitive exclusion agent against bacterial pathogens in poultry.

Authors:  R M La Ragione; A Narbad; M J Gasson; M J Woodward
Journal:  Lett Appl Microbiol       Date:  2004       Impact factor: 2.858

10.  The genome sequence of the probiotic intestinal bacterium Lactobacillus johnsonii NCC 533.

Authors:  R David Pridmore; Bernard Berger; Frank Desiere; David Vilanova; Caroline Barretto; Anne-Cecile Pittet; Marie-Camille Zwahlen; Martine Rouvet; Eric Altermann; Rodolphe Barrangou; Beat Mollet; Annick Mercenier; Todd Klaenhammer; Fabrizio Arigoni; Mark A Schell
Journal:  Proc Natl Acad Sci U S A       Date:  2004-02-24       Impact factor: 11.205
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  14 in total

1.  Metatranscriptome analysis for insight into whole-ecosystem gene expression during spontaneous wheat and spelt sourdough fermentations.

Authors:  Stefan Weckx; Joke Allemeersch; Roel Van der Meulen; Gino Vrancken; Geert Huys; Peter Vandamme; Paul Van Hummelen; Luc De Vuyst
Journal:  Appl Environ Microbiol       Date:  2010-11-19       Impact factor: 4.792

2.  Complete genome sequence of Lactobacillus kefiranofaciens ZW3.

Authors:  Yanping Wang; Jingrui Wang; Zaheer Ahmed; Xiaojia Bai; Jinju Wang
Journal:  J Bacteriol       Date:  2011-06-24       Impact factor: 3.490

3.  Spontaneous mutation reveals influence of exopolysaccharide on Lactobacillus johnsonii surface characteristics.

Authors:  Nikki Horn; Udo Wegmann; Enes Dertli; Francis Mulholland; Samuel R A Collins; Keith W Waldron; Roy J Bongaerts; Melinda J Mayer; Arjan Narbad
Journal:  PLoS One       Date:  2013-03-27       Impact factor: 3.240

4.  Host specific diversity in Lactobacillus johnsonii as evidenced by a major chromosomal inversion and phage resistance mechanisms.

Authors:  Caitriona M Guinane; Robert M Kent; Sarah Norberg; Colin Hill; Gerald F Fitzgerald; Catherine Stanton; R Paul Ross
Journal:  PLoS One       Date:  2011-04-20       Impact factor: 3.240

5.  Genome sequences and comparative genomics of two Lactobacillus ruminis strains from the bovine and human intestinal tracts.

Authors:  Brian M Forde; B Anne Neville; Michelle M O'Donnell; E Riboulet-Bisson; M J Claesson; Avril Coghlan; R Paul Ross; Paul W O'Toole
Journal:  Microb Cell Fact       Date:  2011-08-30       Impact factor: 5.328

6.  Probiotics genomics.

Authors:  Roland J Siezen; Greer Wilson
Journal:  Microb Biotechnol       Date:  2010-01       Impact factor: 5.813

7.  Comparative genomics of Lactobacillus.

Authors:  Ravi Kant; Jochen Blom; Airi Palva; Roland J Siezen; Willem M de Vos
Journal:  Microb Biotechnol       Date:  2010-10-21       Impact factor: 5.813

8.  Impact of the exopolysaccharide layer on biofilms, adhesion and resistance to stress in Lactobacillus johnsonii FI9785.

Authors:  Enes Dertli; Melinda J Mayer; Arjan Narbad
Journal:  BMC Microbiol       Date:  2015-02-04       Impact factor: 3.605

Review 9.  Catabolic flexibility of mammalian-associated lactobacilli.

Authors:  Michelle M O'Donnell; Paul W O'Toole; Reynolds Paul Ross
Journal:  Microb Cell Fact       Date:  2013-05-16       Impact factor: 5.328

10.  EpsA is an essential gene in exopolysaccharide production in Lactobacillus johnsonii FI9785.

Authors:  Enes Dertli; Melinda J Mayer; Ian J Colquhoun; Arjan Narbad
Journal:  Microb Biotechnol       Date:  2015-09-24       Impact factor: 5.813
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