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Literature DB >> 19767426

A 5' leader sequence regulates expression of methanosarcinal CO dehydrogenase/acetyl coenzyme A synthase.

Kimberly L Anderson¹, Ethel E Apolinario, Sheridan R MacAuley, Kevin R Sowers.

Abstract

In vivo expression of CO dehydrogenase/acetyl coenzyme A synthase in Methanosarcina spp. is coordinately regulated in response to substrate by at least two mechanisms: differential transcription initiation and early elongation termination near the 3' end of a 371-bp leader sequence. This is the first report of regulation of transcription elongation in the Archaea.

Entities: Gene

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Year: 2009 PMID： 19767426 PMCID： PMC2772459 DOI： 10.1128/JB.00731-09

Source DB: PubMed Journal: J Bacteriol ISSN： 0021-9193 Impact factor: 3.490

34 in total

1. Sensing small molecules by nascent RNA: a mechanism to control transcription in bacteria.

Authors: Alexander S Mironov; Ivan Gusarov; Ruslan Rafikov; Lubov Errais Lopez; Konstantin Shatalin; Rimma A Kreneva; Daniel A Perumov; Evgeny Nudler
Journal: Cell Date: 2002-11-27 Impact factor: 41.582

2. Global transcriptional analysis of Methanosarcina mazei strain Gö1 under different nitrogen availabilities.

Authors: Katharina Veit; Claudia Ehlers; Armin Ehrenreich; Kirsty Salmon; Raymond Hovey; Robert P Gunsalus; Uwe Deppenmeier; Ruth A Schmitz
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3. Analyzing real-time PCR data by the comparative C(T) method.

Authors: Thomas D Schmittgen; Kenneth J Livak
Journal: Nat Protoc Date: 2008 Impact factor: 13.491

4. Growth and methanogenesis by Methanosarcina strain 227 on acetate and methanol.

Authors: M R Smith; R A Mah
Journal: Appl Environ Microbiol Date: 1978-12 Impact factor: 4.792

5. Adaptation for growth at various saline concentrations by the archaebacterium Methanosarcina thermophila.

Authors: K R Sowers; R P Gunsalus
Journal: J Bacteriol Date: 1988-02 Impact factor: 3.490

Review 6. Transcription attenuation.

Authors: C Yanofsky
Journal: J Biol Chem Date: 1988-01-15 Impact factor: 5.157

7. The Methanosarcina barkeri genome: comparative analysis with Methanosarcina acetivorans and Methanosarcina mazei reveals extensive rearrangement within methanosarcinal genomes.

Authors: Dennis L Maeder; Iain Anderson; Thomas S Brettin; David C Bruce; Paul Gilna; Cliff S Han; Alla Lapidus; William W Metcalf; Elizabeth Saunders; Roxanne Tapia; Kevin R Sowers
Journal: J Bacteriol Date: 2006-09-15 Impact factor: 3.490

8. Transcriptional regulation of the carbon monoxide dehydrogenase gene (cdhA) in Methanosarcina thermophila.

Authors: K R Sowers; T T Thai; R P Gunsalus
Journal: J Biol Chem Date: 1993-11-05 Impact factor: 5.157

9. Stability of mRNA in the hyperthermophilic archaeon Sulfolobus solfataricus.

Authors: Elisabetta Bini; Vidula Dikshit; Kristi Dirksen; Melissa Drozda; Paul Blum
Journal: RNA Date: 2002-09 Impact factor: 4.942

10. Genetic analysis of the methanol- and methylamine-specific methyltransferase 2 genes of Methanosarcina acetivorans C2A.

Authors: Arpita Bose; Matthew A Pritchett; William W Metcalf
Journal: J Bacteriol Date: 2008-03-28 Impact factor: 3.490

5 in total

1. Mechanism for stabilizing mRNAs involved in methanol-dependent methanogenesis of cold-adaptive Methanosarcina mazei zm-15.

Authors: Yi Cao; Jie Li; Na Jiang; Xiuzhu Dong
Journal: Appl Environ Microbiol Date: 2013-12-06 Impact factor: 4.792

Review 2. Fundamentals of methanogenic pathways that are key to the biomethanation of complex biomass.

Authors: James G Ferry
Journal: Curr Opin Biotechnol Date: 2011-05-17 Impact factor: 9.740

3. Function and regulation of isoforms of carbon monoxide dehydrogenase/acetyl coenzyme A synthase in Methanosarcina acetivorans.

Authors: Nicole Matschiavelli; Ellen Oelgeschläger; Berardino Cocchiararo; Johannes Finke; Michael Rother
Journal: J Bacteriol Date: 2012-08-03 Impact factor: 3.490

4. Genome-wide gene expression and RNA half-life measurements allow predictions of regulation and metabolic behavior in Methanosarcina acetivorans.

Authors: Joseph R Peterson; ShengShee Thor; Lars Kohler; Petra R A Kohler; William W Metcalf; Zaida Luthey-Schulten
Journal: BMC Genomics Date: 2016-11-16 Impact factor: 3.969

Review 5. Contribution of transcriptomics to systems-level understanding of methanogenic Archaea.

Authors: Patrick D Browne; Hinsby Cadillo-Quiroz
Journal: Archaea Date: 2013-02-27 Impact factor: 3.273

5 in total