Literature DB >> 19767358

Saccharomonospora marina sp. nov., isolated from an ocean sediment of the East China Sea.

Zui Liu1, Yan Li2, Liu-Qiang Zheng2, Yao-Jian Huang1, Wen-Jun Li3,2.   

Abstract

A novel, aerobic, Gram-positive actinomycete strain, designated XMU15T, was isolated from an ocean sediment collected from Zhaoan Bay in the East China Sea and was subjected to a polyphasic approach to determine its taxonomic position. The isolate grew optimally at 28 degrees C and at pH 7.0 in the presence of 3% (w/v) NaCl on ISP medium 2. Gelatin liquefaction, milk coagulation and nitrate reduction were positive. Cellulose and starch hydrolysis, hydrogen sulfide and melanin production, and catalase, urease and oxidase activities were negative. The predominant menaquinone of the isolate was MK-9 (H4), and meso-diaminopimelic acid was the diagnostic amino acid in the cell wall. The phospholipids of the isolate comprised diphosphatidylglycerol, phosphatidylglycerol, phosphatidylinositol, and a minor amount of phosphatidylethanolamine. The major fatty acids of the strain were iso-C16:0 (26.36%), C17:1omega6c (16.80%), C15:0 (16.2%), C16:0 (8.90%), C17:1omega8c (7.69%) and iso-C16:1 H (5.95%). The DNA G+C content of the genomic DNA was 68.1 mol%. A phylogenetic tree based on 16S rRNA gene sequences showed that the isolate fell within the evolutionary radiation encompassed by the genus Saccharomonospora and showed the highest 16S rRNA gene sequence similarity (96.7%) to Saccharomonospora xinjiangensis DSM 44391T. Based on the results of 16S rRNA gene sequence analysis and phenotypic and genotypic characterization, strain XMU15T (=KCTC 19701T =CCTCC AA 209048T) represents a novel species of the genus Saccharomonospora, for which the name Saccharomonospora marina sp. nov. is proposed.

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Year:  2009        PMID: 19767358     DOI: 10.1099/ijs.0.017038-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  6 in total

1.  Marine Actinobacteria from the Gulf of California: diversity, abundance and secondary metabolite biosynthetic potential.

Authors:  Amayaly Becerril-Espinosa; Kelle C Freel; Paul R Jensen; Irma E Soria-Mercado
Journal:  Antonie Van Leeuwenhoek       Date:  2012-12-11       Impact factor: 2.271

2.  Genome sequence of the ocean sediment bacterium Saccharomonospora marina type strain (XMU15(T)).

Authors:  Hans-Peter Klenk; Megan Lu; Susan Lucas; Alla Lapidus; Alex Copeland; Sam Pitluck; Lynne A Goodwin; Cliff Han; Roxanne Tapia; Evelyne-Marie Brambilla; Gabriele Pötter; Miriam Land; Natalia Ivanova; Manfred Rohde; Markus Göker; John C Detter; Wen-Jun Li; Nikos C Kyrpides; Tanja Woyke
Journal:  Stand Genomic Sci       Date:  2012-05-15

3.  Genome sequence of the soil bacterium Saccharomonospora azurea type strain (NA-128(T)).

Authors:  Hans-Peter Klenk; Brittany Held; Susan Lucas; Alla Lapidus; Alex Copeland; Nancy Hammon; Sam Pitluck; Lynne A Goodwin; Cliff Han; Roxanne Tapia; Evelyne-Marie Brambilla; Gabriele Pötter; Miriam Land; Natalia Ivanova; Manfred Rohde; Markus Göker; John C Detter; Nikos C Kyrpides; Tanja Woyke
Journal:  Stand Genomic Sci       Date:  2012-05-05

4.  Genome sequence of the chemoheterotrophic soil bacterium Saccharomonospora cyanea type strain (NA-134(T)).

Authors:  Jan P Meier-Kolthoff; Megan Lu; Marcel Huntemann; Susan Lucas; Alla Lapidus; Alex Copeland; Sam Pitluck; Lynne A Goodwin; Cliff Han; Roxanne Tapia; Gabriele Pötter; Miriam Land; Natalia Ivanova; Manfred Rohde; Markus Göker; John C Detter; Tanja Woyke; Nikos C Kyrpides; Hans-Peter Klenk
Journal:  Stand Genomic Sci       Date:  2013-09-30

5.  Saccharomonopyrones A-C, New α-Pyrones from a Marine Sediment-Derived Bacterium Saccharomonospora sp. CNQ-490.

Authors:  Chae-Yoon Yim; Tu Cam Le; Tae Gu Lee; Inho Yang; Hansol Choi; Jusung Lee; Kyung-Yun Kang; Jin Sil Lee; Kyung-Min Lim; Sung-Tae Yee; Heonjoong Kang; Sang-Jip Nam; William Fenical
Journal:  Mar Drugs       Date:  2017-08-03       Impact factor: 5.118

6.  Saccharobisindole, Neoasterric Methyl Ester, and 7-Chloro-4(1H)-quinolone: Three New Compounds Isolated from the Marine Bacterium Saccharomonospora sp.

Authors:  Sohee Kim; Tu Cam Le; Sang-Ah Han; Prima F Hillman; Ahreum Hong; Sunghoon Hwang; Young Eun Du; Hiyoung Kim; Dong-Chan Oh; Sun-Shin Cha; Jihye Lee; Sang-Jip Nam; William Fenical
Journal:  Mar Drugs       Date:  2021-12-29       Impact factor: 5.118

  6 in total

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