Literature DB >> 19766655

Identification of the interactions critical for propeptide-catalyzed folding of Tk-subtilisin.

Shun-ichi Tanaka1, Hiroyoshi Matsumura, Yuichi Koga, Kazufumi Takano, Shigenori Kanaya.   

Abstract

Tk-subtilisin requires Ca(2+) for folding. This folding is accelerated by the chaperone function of its propeptide (Tkpro). Several Tkpro and Tk-subtilisin derivatives were constructed to examine whether the interactions between the C-terminal extended region of Tkpro and Tk-subtilisin and Glu61/Asp63- and Glu201-mediated hydrogen bonds at the domain interface are important for the chaperone function of Tkpro. The Tkpro derivatives with a series of C-terminal truncations and double mutations at Glu61 and Asp63 exhibited weaker chaperone functions than Tkpro for SA-subtilisin (active-site mutant of Tk-subtilisin). Good correlation was observed between their chaperone functions and binding abilities to the folded SA-subtilisin protein. These results suggest that the C-terminal extended region, Glu61, and Asp63 of Tkpro are not critical for folding of Tk-subtilisin but accelerate it by binding to a folding intermediate of Tk-subtilisin with a native-like structure at their binding sites. In contrast, Tkpro exhibited little chaperone function for E201A/SA-subtilisin. It could bind to the folded E201A/SA-subtilisin protein with a lower association constant than that for SA-subtilisin. These results suggest a loop of Tkpro, which interacts with Glu201 of Tk-subtilisin through hydrogen bonds and is required for folding of Tk-subtilisin by binding to a folding intermediate of Tk-subtilisin with a nonnative structure. Because this loop is fairly hydrophobic and tightly packs to the surface parallel helices of the central alphabetaalpha substructure of Tk-subtilisin, binding of this loop to Glu201 may induce association of these two helices and thereby formation of the alphabetaalpha substructure. We propose that Glu201-mediated interactions are critical for initiation of Tkpro-catalyzed folding of Tk-subtilisin.

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Year:  2009        PMID: 19766655     DOI: 10.1016/j.jmb.2009.09.028

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  7 in total

1.  Requirement of insertion sequence IS1 for thermal adaptation of Pro-Tk-subtilisin from hyperthermophilic archaeon.

Authors:  Ryo Uehara; Shun-Ichi Tanaka; Kazufumi Takano; Yuichi Koga; Shigenori Kanaya
Journal:  Extremophiles       Date:  2012-09-21       Impact factor: 2.395

2.  Increase in activation rate of Pro-Tk-subtilisin by a single nonpolar-to-polar amino acid substitution at the hydrophobic core of the propeptide domain.

Authors:  Kota Yuzaki; Yudai Sanda; Dong-Ju You; Ryo Uehara; Yuichi Koga; Shigenori Kanaya
Journal:  Protein Sci       Date:  2013-10-19       Impact factor: 6.725

3.  Structural Basis for Action of the External Chaperone for a Propeptide-deficient Serine Protease from Aeromonas sobria.

Authors:  Hidetomo Kobayashi; Toru Yoshida; Takuya Miyakawa; Mitsuru Tashiro; Keinosuke Okamoto; Hiroyasu Yamanaka; Masaru Tanokura; Hideaki Tsuge
Journal:  J Biol Chem       Date:  2015-03-16       Impact factor: 5.157

Review 4.  An overview of 25 years of research on Thermococcus kodakarensis, a genetically versatile model organism for archaeal research.

Authors:  Naeem Rashid; Mehwish Aslam
Journal:  Folia Microbiol (Praha)       Date:  2019-07-08       Impact factor: 2.099

5.  Structure, Assembly, and Function of Tripartite Efflux and Type 1 Secretion Systems in Gram-Negative Bacteria.

Authors:  Ilyas Alav; Jessica Kobylka; Miriam S Kuth; Klaas M Pos; Martin Picard; Jessica M A Blair; Vassiliy N Bavro
Journal:  Chem Rev       Date:  2021-04-28       Impact factor: 60.622

6.  Extracellular production of the engineered thermostable protease pernisine from Aeropyrum pernix K1 in Streptomyces rimosus.

Authors:  Marko Šnajder; Andrés Felipe Carrillo Rincón; Vasilka Magdevska; Miha Bahun; Luka Kranjc; Maja Paš; Polona Juntes; Hrvoje Petković; Nataša Poklar Ulrih
Journal:  Microb Cell Fact       Date:  2019-11-07       Impact factor: 5.328

7.  Enzymatic activity of a subtilisin homolog, Tk-SP, from Thermococcus kodakarensis in detergents and its ability to degrade the abnormal prion protein.

Authors:  Azumi Hirata; Yuki Hori; Yuichi Koga; Jun Okada; Akikazu Sakudo; Kazuyoshi Ikuta; Shigenori Kanaya; Kazufumi Takano
Journal:  BMC Biotechnol       Date:  2013-02-28       Impact factor: 2.563

  7 in total

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