Literature DB >> 19757836

Dynamic disorder-driven substrate inhibition and bistability in a simple enzymatic reaction.

Srabanti Chaudhury1, Oleg A Igoshin.   

Abstract

Conformations and catalytic rates of enzymes (biological catalysts) fluctuate over a wide range of time scales. Recent experimental and theoretical investigations demonstrated case studies where the enzymatic catalysis rate follows the Michaelis-Menten (MM) rate law despite molecular fluctuations. In this paper, we investigate deviations from MM law and their effects on the dynamical behavior of the enzymatic network. We consider a simple kinetic scheme for a single substrate enzymatic reaction in which the product release step is treated explicitly. We examine how conformational fluctuations affect the underlying rate law in the quasi-static limit when conformational dynamics is very slow in one of the states. Our numerical results and analytically solvable model indicate that slow conformational fluctuations of the enzyme-substrate complex lead to non-MM behavior, substrate inhibition, and possible bistability of the reaction network.

Mesh:

Substances:

Year:  2009        PMID: 19757836     DOI: 10.1021/jp907908d

Source DB:  PubMed          Journal:  J Phys Chem B        ISSN: 1520-5207            Impact factor:   2.991


  4 in total

Review 1.  Non-transcriptional regulatory processes shape transcriptional network dynamics.

Authors:  J Christian J Ray; Jeffrey J Tabor; Oleg A Igoshin
Journal:  Nat Rev Microbiol       Date:  2011-10-11       Impact factor: 60.633

Review 2.  Bistable responses in bacterial genetic networks: designs and dynamical consequences.

Authors:  Abhinav Tiwari; J Christian J Ray; Jatin Narula; Oleg A Igoshin
Journal:  Math Biosci       Date:  2011-03-06       Impact factor: 2.144

3.  Dynamic disorder in quasi-equilibrium enzymatic systems.

Authors:  Srabanti Chaudhury; Oleg A Igoshin
Journal:  PLoS One       Date:  2010-08-24       Impact factor: 3.240

4.  Database constraints applied to metabolic pathway reconstruction tools.

Authors:  Jordi Vilaplana; Francesc Solsona; Ivan Teixido; Anabel Usié; Hiren Karathia; Rui Alves; Jordi Mateo
Journal:  ScientificWorldJournal       Date:  2014-08-17
  4 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.