Literature DB >> 19757170

Validation of endogenous reference genes for insecticide-induced and developmental expression profiling of Liposcelis bostsrychophila (Psocoptera: Liposcelididae).

Hong-Bo Jiang1, Yong-Hua Liu, Pei-An Tang, An-Wei Zhou, Jin-Jun Wang.   

Abstract

Four housekeeping genes named Lbbeta-Actin1, Lbbeta-Actin2, Lbalpha-Tubulin, and LbGapdh were cloned from Liposcelis bostrychophila using the combined techniques of reverse transcriptase-PCR (RT-PCR) with rapid amplification of cDNA ends (RACE). The GenBank accession numbers were FJ196622, FJ447483, FJ595242, and FJ595241, respectively. The full-length cDNA of Lbbeta-Actin1 was a 1,772 bp sequence with an open reading frame (ORF) encoded 376 amino acids, while Lbbeta-Actin2 was 1,350 bp in length containing an ORF encoded 376 amino acids. Furthermore, the 1,565 bp cDNA of Lbalpha-Tubulin had an ORF of 1,350 bp encoding 450 amino acids. And LbGapdh possessed an ORF of 333 amino acids. Sequences analysis and phylogenetic trees generated from the nucleotide sequences of their coding regions revealed a relationship that was closer to other insects than to mammals. The four genes together with 18S rRNA were quantified for transcription stability in L. bostrychophila, and the geNorm software ranked from the most to least were Lbbeta-Actin1 > LbGapdh > Lbalpha-Tubulin > Lbbeta-Actin2 > Lb18S rRNA for deltamethrin induction, while ranked Lbbeta-Actin1 > Lbalpha-Tubulin > Lbbeta-Actin2 > LbGapdh > Lb18S rRNA for the different developmental stages.

Entities:  

Mesh:

Substances:

Year:  2010        PMID: 19757170     DOI: 10.1007/s11033-009-9803-0

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  28 in total

Review 1.  An overview of real-time quantitative PCR: applications to quantify cytokine gene expression.

Authors:  A Giulietti; L Overbergh; D Valckx; B Decallonne; R Bouillon; C Mathieu
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

2.  Analysis of relative gene expression data using real-time quantitative PCR and the 2(-Delta Delta C(T)) Method.

Authors:  K J Livak; T D Schmittgen
Journal:  Methods       Date:  2001-12       Impact factor: 3.608

Review 3.  Control genes in quantitative molecular biological techniques: the variability of invariance.

Authors:  S R Stürzenbaum; P Kille
Journal:  Comp Biochem Physiol B Biochem Mol Biol       Date:  2001-10       Impact factor: 2.231

4.  Quantification of mRNA using real-time RT-PCR.

Authors:  Tania Nolan; Rebecca E Hands; Stephen A Bustin
Journal:  Nat Protoc       Date:  2006       Impact factor: 13.491

Review 5.  Real-time PCR for mRNA quantitation.

Authors:  Marisa L Wong; Juan F Medrano
Journal:  Biotechniques       Date:  2005-07       Impact factor: 1.993

6.  Isolation of the Pichia pastoris glyceraldehyde-3-phosphate dehydrogenase gene and regulation and use of its promoter.

Authors:  H R Waterham; M E Digan; P J Koutz; S V Lair; J M Cregg
Journal:  Gene       Date:  1997-02-20       Impact factor: 3.688

7.  Stability of reference genes for real-time PCR analyses in channel catfish (Ictalurus punctatus) tissues under varying physiological conditions.

Authors:  Brian C Small; Christopher A Murdock; A Lelania Bilodeau-Bourgeois; Brian C Peterson; Geoffrey C Waldbieser
Journal:  Comp Biochem Physiol B Biochem Mol Biol       Date:  2008-07-22       Impact factor: 2.231

8.  Molecular characterization of two nicotinic acetylcholine receptor subunits from Liposcelis bostrychophila Badonnel (Psocoptera: Liposcelididae).

Authors:  Pei-An Tang; Hong-Bo Jiang; Yong-Qiang Xu; Feng-Ming An; Jin-Jun Wang
Journal:  Arch Insect Biochem Physiol       Date:  2009-09       Impact factor: 1.698

9.  Evaluation of potential reference genes in real-time RT-PCR studies of Atlantic salmon.

Authors:  Pål A Olsvik; Kai K Lie; Ann-Elise O Jordal; Tom O Nilsen; Ivar Hordvik
Journal:  BMC Mol Biol       Date:  2005-11-17       Impact factor: 2.946

10.  Accurate normalization of real-time quantitative RT-PCR data by geometric averaging of multiple internal control genes.

Authors:  Jo Vandesompele; Katleen De Preter; Filip Pattyn; Bruce Poppe; Nadine Van Roy; Anne De Paepe; Frank Speleman
Journal:  Genome Biol       Date:  2002-06-18       Impact factor: 13.583

View more
  24 in total

1.  Evaluation of endogenous reference genes for analysis of gene expression with real-time RT-PCR during planarian regeneration.

Authors:  Yan-Qing Yuwen; Zi-Mei Dong; Qing-Hua Wang; Xiao-Juan Sun; Chang-Ying Shi; Guang-Wen Chen
Journal:  Mol Biol Rep       Date:  2010-12-14       Impact factor: 2.316

2.  Identification of suitable endogenous control genes for quantitative RT-PCR analysis of miRNA in bovine solid tissues.

Authors:  Dongwei Li; Hongyu Liu; Yunsheng Li; Manman Yang; Changqing Qu; Yunhai Zhang; Ya Liu; Xiaorong Zhang
Journal:  Mol Biol Rep       Date:  2014-06-29       Impact factor: 2.316

3.  Molecular characterization of three heat shock protein 70 genes and their expression profiles under thermal stress in the citrus red mite.

Authors:  Li-Hong Yang; Hong-Bo Jiang; Yong-Hua Liu; Wei Dou; Jin-Jun Wang
Journal:  Mol Biol Rep       Date:  2011-06-30       Impact factor: 2.316

4.  Screening Potential Reference Genes in Tuta absoluta with Real-Time Quantitative PCR Analysis under Different Experimental Conditions.

Authors:  An-Pei Yang; Yu-Sheng Wang; Cong Huang; Zhi-Chuang Lv; Wan-Xue Liu; Si-Yan Bi; Fang-Hao Wan; Qiang Wu; Gui-Fen Zhang
Journal:  Genes (Basel)       Date:  2021-08-17       Impact factor: 4.096

5.  Evaluation of endogenous references for gene expression profiling in different tissues of the oriental fruit fly Bactrocera dorsalis (Diptera: Tephritidae).

Authors:  Guang-Mao Shen; Hong-Bo Jiang; Xiao-Na Wang; Jin-Jun Wang
Journal:  BMC Mol Biol       Date:  2010-10-06       Impact factor: 2.946

6.  Validation of reference genes for expression analysis in the salivary gland and the intestine of Rhodnius prolixus (Hemiptera, Reduviidae) under different experimental conditions by quantitative real-time PCR.

Authors:  Rafaela M Paim; Marcos H Pereira; Raffaello Di Ponzio; Juliana O Rodrigues; Alessandra A Guarneri; Nelder F Gontijo; Ricardo N Araújo
Journal:  BMC Res Notes       Date:  2012-03-06

7.  Population genetics of two asexually and sexually reproducing psocids species inferred by the analysis of mitochondrial and nuclear DNA sequences.

Authors:  Dan-Dan Wei; Ming-Long Yuan; Bao-Jun Wang; An-Wei Zhou; Wei Dou; Jin-Jun Wang
Journal:  PLoS One       Date:  2012-03-27       Impact factor: 3.240

8.  Assessment and validation of a suite of reverse transcription-quantitative PCR reference genes for analyses of density-dependent behavioural plasticity in the Australian plague locust.

Authors:  Marie-Pierre Chapuis; Donya Tohidi-Esfahani; Tim Dodgson; Laurence Blondin; Fleur Ponton; Darron Cullen; Stephen J Simpson; Gregory A Sword
Journal:  BMC Mol Biol       Date:  2011-02-16       Impact factor: 2.946

9.  Reference gene selection for qRT-PCR analysis in the sweetpotato whitefly, Bemisia tabaci (Hemiptera: Aleyrodidae).

Authors:  Rumei Li; Wen Xie; Shaoli Wang; Qingjun Wu; Nina Yang; Xin Yang; Huipeng Pan; Xiaomao Zhou; Lianyang Bai; Baoyun Xu; Xuguo Zhou; Youjun Zhang
Journal:  PLoS One       Date:  2013-01-08       Impact factor: 3.240

10.  Validation of reference genes for expression analysis by quantitative real-time PCR in Leptinotarsa decemlineata (Say).

Authors:  Xiao-Qin Shi; Wen-Chao Guo; Pin-Jun Wan; Li-Tao Zhou; Xiang-Liang Ren; Tursun Ahmat; Kai-Yun Fu; Guo-Qing Li
Journal:  BMC Res Notes       Date:  2013-03-13
View more

北京卡尤迪生物科技股份有限公司 © 2022-2023.