Literature DB >> 19756204

Highly-parallel metabolomics approaches using LC-MS for pharmaceutical and environmental analysis.

Sunil Bajad1, Vladimir Shulaev.   

Abstract

The 'omics' approaches - genomics, proteomics and metabolomics - are based on high-throughput, high-information-content analysis. Using these approaches, as opposed to targeting one or a few analytes, a holistic understanding of the composition of a sample can be obtained. These approaches have revolutionized sample-analysis and data-processing protocols. In metabolomic studies, hundreds of small molecules are simultaneously analyzed using analytical platforms (e.g., gas chromatography-mass spectrometry (GC-MS) or liquid chromatography coupled to tandem mass spectrometry (LC-MS(2))). This philosophy of holistic analysis and the application of high-throughput, high-information-content analysis offer several advantages. In this article, we compare the conventional analytical approach of one or a few analytes per sample to the LC-MS(2)-based metabolomics-type approach in the context of pharmaceutical and environmental analysis.

Year:  2007        PMID: 19756204      PMCID: PMC2743279          DOI: 10.1016/j.trac.2007.02.009

Source DB:  PubMed          Journal:  Trends Analyt Chem        ISSN: 0165-9936            Impact factor:   12.296


  65 in total

1.  Analysis of codon usage diversity of bacterial genes with a self-organizing map (SOM): characterization of horizontally transferred genes with emphasis on the E. coli O157 genome.

Authors:  S Kanaya; M Kinouchi; T Abe; Y Kudo; Y Yamada; T Nishi; H Mori; T Ikemura
Journal:  Gene       Date:  2001-10-03       Impact factor: 3.688

2.  Metabolomic applications of electrochemistry/mass spectrometry.

Authors:  Paul H Gamache; David F Meyer; Michael C Granger; Ian N Acworth
Journal:  J Am Soc Mass Spectrom       Date:  2004-12       Impact factor: 3.109

3.  Validation study on 660 pesticide residues in animal tissues by gel permeation chromatography cleanup/gas chromatography-mass spectrometry and liquid chromatography-tandem mass spectrometry.

Authors:  Guo-Fang Pang; Yan-Zhong Cao; Jin-Jie Zhang; Chun-Lin Fan; Yong-Ming Liu; Xue-Min Li; Guang-Qun Jia; Zeng-Yin Li; Yu-Qiu Shi; Yan-Ping Wu; Tong-Tong Guo
Journal:  J Chromatogr A       Date:  2006-06-19       Impact factor: 4.759

4.  Quantitative determination of forty-eight antidepressants and antipsychotics in human serum by HPLC tandem mass spectrometry: a multi-level, single-sample approach.

Authors:  H Kirchherr; W N Kühn-Velten
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2006-06-23       Impact factor: 3.205

5.  Ultra-performance liquid chromatography/time-of-flight mass spectrometry based metabolomics of raw and steamed Panax notoginseng.

Authors:  Eric C Y Chan; Swee-Lee Yap; Aik-Jiang Lau; Pay-Chin Leow; Ding-Fung Toh; Hwee-Ling Koh
Journal:  Rapid Commun Mass Spectrom       Date:  2007       Impact factor: 2.419

6.  Comprehensive two-dimensional normal-phase (adsorption)-reversed-phase liquid chromatography.

Authors:  Paola Dugo; Olinda Favoino; Rosario Luppino; Giovanni Dugo; Luigi Mondello
Journal:  Anal Chem       Date:  2004-05-01       Impact factor: 6.986

7.  Simultaneous determination of indinavir, ritonavir and saquinavir in plasma by high-performance liquid chromatography.

Authors:  Szu-Min Hsieh; Hsiu-Ying Yu; Shan-Chwen Chang
Journal:  J Formos Med Assoc       Date:  2004-03       Impact factor: 3.282

8.  Therapeutic drug monitoring of 13 antidepressant and five neuroleptic drugs in serum with liquid chromatography-electrospray ionization mass spectrometry.

Authors:  Ursula Gutteck; Katharina M Rentsch
Journal:  Clin Chem Lab Med       Date:  2003-12       Impact factor: 3.694

9.  A rapid and sensitive method for simultaneous determination of lamivudine and zidovudine in human serum by on-line solid-phase extraction coupled to liquid chromatography/tandem mass spectrometry detection.

Authors:  Rita de Cassia E Estrela; Myriam C Salvadori; Guilherme Suarez-Kurtz
Journal:  Rapid Commun Mass Spectrom       Date:  2004       Impact factor: 2.419

Review 10.  Measuring the metabolome: current analytical technologies.

Authors:  Warwick B Dunn; Nigel J C Bailey; Helen E Johnson
Journal:  Analyst       Date:  2005-03-04       Impact factor: 4.616

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  5 in total

1.  Analytical strategies for LC-MS-based targeted metabolomics.

Authors:  Wenyun Lu; Bryson D Bennett; Joshua D Rabinowitz
Journal:  J Chromatogr B Analyt Technol Biomed Life Sci       Date:  2008-04-29       Impact factor: 3.205

2.  A mass spectrometric study for comparative analysis and evaluation of metabolite recovery from plasma by various solvent systems.

Authors:  Anwesha Dutta; Premalatha Shetty; Smitha Bhat; Yeshaswini Ramachandra; Shrinidhi Hegde
Journal:  J Biomol Tech       Date:  2012-12

Review 3.  Spectral deconvolution for gas chromatography mass spectrometry-based metabolomics: current status and future perspectives.

Authors:  Xiuxia Du; Steven H Zeisel
Journal:  Comput Struct Biotechnol J       Date:  2013-06-28       Impact factor: 7.271

Review 4.  A plant-mediated synthesis of nanostructured hydroxyapatite for biomedical applications: a review.

Authors:  Kingdom Alorku; M Manoj; Aihua Yuan
Journal:  RSC Adv       Date:  2020-11-10       Impact factor: 4.036

Review 5.  Proteomics and Metabolomics: Two Emerging Areas for Legume Improvement.

Authors:  Abirami Ramalingam; Himabindu Kudapa; Lekha T Pazhamala; Wolfram Weckwerth; Rajeev K Varshney
Journal:  Front Plant Sci       Date:  2015-12-24       Impact factor: 5.753

  5 in total

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