Literature DB >> 19752045

Chromatin insulators: lessons from the fly.

B V Gurudatta1, Victor G Corces.   

Abstract

Chromatin insulators are DNA-protein complexes with broad functions in nuclear biology. Drosophila has at least five different types of insulators; recent results suggest that these different insulators share some components that may allow them to function through common mechanisms. Data from genome-wide localization studies of insulator proteins indicate a possible functional specialization, with different insulators playing distinct roles in nuclear biology. Cells have developed mechanisms to control insulator activity by recruiting specialized proteins or by covalent modification of core components. Current results suggest that insulators set up cell-specific blueprints of nuclear organization that may contribute to the establishment of different patterns of gene expression during cell differentiation and development.

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Year:  2009        PMID: 19752045      PMCID: PMC2742804          DOI: 10.1093/bfgp/elp032

Source DB:  PubMed          Journal:  Brief Funct Genomic Proteomic        ISSN: 1473-9550


  35 in total

1.  A chromatin insulator determines the nuclear localization of DNA.

Authors:  T I Gerasimova; K Byrd; V G Corces
Journal:  Mol Cell       Date:  2000-11       Impact factor: 17.970

2.  Protein determinants of insertional specificity for the Drosophila gypsy retrovirus.

Authors:  M Labrador; V G Corces
Journal:  Genetics       Date:  2001-07       Impact factor: 4.562

3.  Protein:protein interactions and the pairing of boundary elements in vivo.

Authors:  Jason Blanton; Miklos Gaszner; Paul Schedl
Journal:  Genes Dev       Date:  2003-03-01       Impact factor: 11.361

4.  Interactions between the Su(Hw) and Mod(mdg4) proteins required for gypsy insulator function.

Authors:  D Ghosh; T I Gerasimova; V G Corces
Journal:  EMBO J       Date:  2001-05-15       Impact factor: 11.598

5.  A novel boundary element may facilitate independent gene regulation in the Antennapedia complex of Drosophila.

Authors:  Vladimir E Belozerov; Parimal Majumder; Ping Shen; Haini N Cai
Journal:  EMBO J       Date:  2003-06-16       Impact factor: 11.598

6.  Evidence for an antagonistic relationship between the boundary element-associated factor BEAF and the transcription factor DREF.

Authors:  C M Hart; O Cuvier; U K Laemmli
Journal:  Chromosoma       Date:  1999-11       Impact factor: 4.316

7.  Insulation of enhancer-promoter communication by a gypsy transposon insert in the Drosophila cut gene: cooperation between suppressor of hairy-wing and modifier of mdg4 proteins.

Authors:  M Gause; P Morcillo; D Dorsett
Journal:  Mol Cell Biol       Date:  2001-07       Impact factor: 4.272

8.  Interaction between the GAGA factor and Mod(mdg4) proteins promotes insulator bypass in Drosophila.

Authors:  Larisa Melnikova; François Juge; Natalia Gruzdeva; Aleksandr Mazur; Giacomo Cavalli; Pavel Georgiev
Journal:  Proc Natl Acad Sci U S A       Date:  2004-10-01       Impact factor: 11.205

9.  The Drosophila melanogaster suppressor of Hairy-wing protein binds to specific sequences of the gypsy retrotransposon.

Authors:  C Spana; D A Harrison; V G Corces
Journal:  Genes Dev       Date:  1988-11       Impact factor: 11.361

10.  Visualization of chromatin domains created by the gypsy insulator of Drosophila.

Authors:  Keith Byrd; Victor G Corces
Journal:  J Cell Biol       Date:  2003-08-18       Impact factor: 10.539

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  37 in total

1.  A barrier-only boundary element delimits the formation of facultative heterochromatin in Drosophila melanogaster and vertebrates.

Authors:  Nianwei Lin; Xingguo Li; Kairong Cui; Iouri Chepelev; Feng Tie; Bo Liu; Guangyao Li; Peter Harte; Keji Zhao; Suming Huang; Lei Zhou
Journal:  Mol Cell Biol       Date:  2011-04-25       Impact factor: 4.272

Review 2.  In the loop: long range chromatin interactions and gene regulation.

Authors:  Ann Dean
Journal:  Brief Funct Genomics       Date:  2011-01-22       Impact factor: 4.241

3.  Ibf1 and Ibf2 are novel CP190-interacting proteins required for insulator function.

Authors:  Sergi Cuartero; Ujué Fresán; Oscar Reina; Evarist Planet; M Lluisa Espinàs
Journal:  EMBO J       Date:  2014-02-06       Impact factor: 11.598

4.  The BEAF insulator regulates genes involved in cell polarity and neoplastic growth.

Authors:  B V Gurudatta; Edward Ramos; Victor G Corces
Journal:  Dev Biol       Date:  2012-06-26       Impact factor: 3.582

5.  The role of the Suppressor of Hairy-wing insulator protein in Drosophila oogenesis.

Authors:  Ryan M Baxley; Alexey A Soshnev; Dmitry E Koryakov; Igor F Zhimulev; Pamela K Geyer
Journal:  Dev Biol       Date:  2011-05-30       Impact factor: 3.582

6.  The insulator protein Suppressor of Hairy-wing is an essential transcriptional repressor in the Drosophila ovary.

Authors:  Alexey A Soshnev; Ryan M Baxley; J Robert Manak; Kai Tan; Pamela K Geyer
Journal:  Development       Date:  2013-07-24       Impact factor: 6.868

7.  Dynamic changes in the genomic localization of DNA replication-related element binding factor during the cell cycle.

Authors:  B V Gurudatta; Jingping Yang; Kevin Van Bortle; Paul G Donlin-Asp; Victor G Corces
Journal:  Cell Cycle       Date:  2013-04-25       Impact factor: 4.534

Review 8.  Nuclear organization and genome function.

Authors:  Kevin Van Bortle; Victor G Corces
Journal:  Annu Rev Cell Dev Biol       Date:  2012-08-17       Impact factor: 13.827

Review 9.  Chromatin insulators: linking genome organization to cellular function.

Authors:  Jennifer E Phillips-Cremins; Victor G Corces
Journal:  Mol Cell       Date:  2013-05-23       Impact factor: 17.970

10.  Computational Identification of Genomic Features That Influence 3D Chromatin Domain Formation.

Authors:  Raphaël Mourad; Olivier Cuvier
Journal:  PLoS Comput Biol       Date:  2016-05-20       Impact factor: 4.475

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