Literature DB >> 19748477

Enzymatic stereospecific preparation of fluorescent S-adenosyl-L-methionine analogs.

Otmar M Ottink1, Frank H T Nelissen, Yvonne Derks, Sybren S Wijmenga, Hans A Heus.   

Abstract

S-Adenosyl-L-methionine (SAM) is the preferred cofactor for biological methyl group transfers to various substrates such as nucleic acids, proteins, and lipids. Here we present stereospecific (>95% of the desired enantiomer) and high-yield preparation of four fluorescent and biologically active SAM analogs and demonstrate their usefulness in binding studies. Using a fluorescence titration experiment, we obtained a K(d) of 0.38 microM for the S-2,6-diaminopurinylmethionine-SAM-III riboswitch complex.

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Year:  2009        PMID: 19748477     DOI: 10.1016/j.ab.2009.09.013

Source DB:  PubMed          Journal:  Anal Biochem        ISSN: 0003-2697            Impact factor:   3.365


  14 in total

1.  Chemoenzymatic synthesis and utilization of a SAM analog with an isomorphic nucleobase.

Authors:  C Vranken; A Fin; P Tufar; J Hofkens; M D Burkart; Y Tor
Journal:  Org Biomol Chem       Date:  2016-06-06       Impact factor: 3.876

2.  Structure and Biophysical Characterization of the S-Adenosylmethionine-dependent O-Methyltransferase PaMTH1, a Putative Enzyme Accumulating during Senescence of Podospora anserina.

Authors:  Deep Chatterjee; Denis Kudlinzki; Verena Linhard; Krishna Saxena; Ulrich Schieborr; Santosh L Gande; Jan Philip Wurm; Jens Wöhnert; Rupert Abele; Vladimir V Rogov; Volker Dötsch; Heinz D Osiewacz; Sridhar Sreeramulu; Harald Schwalbe
Journal:  J Biol Chem       Date:  2015-05-15       Impact factor: 5.157

3.  Structure-guided design of fluorescent S-adenosylmethionine analogs for a high-throughput screen to target SAM-I riboswitch RNAs.

Authors:  Scott F Hickey; Ming C Hammond
Journal:  Chem Biol       Date:  2014-02-20

4.  Facile chemoenzymatic strategies for the synthesis and utilization of S-adenosyl-(L)-methionine analogues.

Authors:  Shanteri Singh; Jianjun Zhang; Tyler D Huber; Manjula Sunkara; Katherine Hurley; Randal D Goff; Guojun Wang; Wen Zhang; Chunming Liu; Jürgen Rohr; Steven G Van Lanen; Andrew J Morris; Jon S Thorson
Journal:  Angew Chem Int Ed Engl       Date:  2014-03-11       Impact factor: 15.336

Review 5.  Fluorescent indicator displacement assays to identify and characterize small molecule interactions with RNA.

Authors:  Sarah L Wicks; Amanda E Hargrove
Journal:  Methods       Date:  2019-04-30       Impact factor: 3.608

6.  Quantification of Oxidized 5-Methylcytosine Bases and TET Enzyme Activity.

Authors:  M Y Liu; J E DeNizio; R M Kohli
Journal:  Methods Enzymol       Date:  2016-02-01       Impact factor: 1.600

Review 7.  SAM/SAH Analogs as Versatile Tools for SAM-Dependent Methyltransferases.

Authors:  Jing Zhang; Yujun George Zheng
Journal:  ACS Chem Biol       Date:  2015-11-16       Impact factor: 5.100

8.  Understanding molecular recognition of promiscuity of thermophilic methionine adenosyltransferase sMAT from Sulfolobus solfataricus.

Authors:  Fengbin Wang; Shanteri Singh; Jianjun Zhang; Tyler D Huber; Kate E Helmich; Manjula Sunkara; Katherine A Hurley; Randal D Goff; Craig A Bingman; Andrew J Morris; Jon S Thorson; George N Phillips
Journal:  FEBS J       Date:  2014-04-07       Impact factor: 5.542

9.  A general method for rapid and cost-efficient large-scale production of 5' capped RNA.

Authors:  Anna-Lisa Fuchs; Ancilla Neu; Remco Sprangers
Journal:  RNA       Date:  2016-07-01       Impact factor: 4.942

10.  Tet2 Catalyzes Stepwise 5-Methylcytosine Oxidation by an Iterative and de novo Mechanism.

Authors:  Daniel J Crawford; Monica Yun Liu; Christopher S Nabel; Xing-Jun Cao; Benjamin A Garcia; Rahul M Kohli
Journal:  J Am Chem Soc       Date:  2016-01-13       Impact factor: 15.419

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