Literature DB >> 19748357

miR-24 Inhibits cell proliferation by targeting E2F2, MYC, and other cell-cycle genes via binding to "seedless" 3'UTR microRNA recognition elements.

Ashish Lal1, Francisco Navarro, Christopher A Maher, Laura E Maliszewski, Nan Yan, Elizabeth O'Day, Dipanjan Chowdhury, Derek M Dykxhoorn, Perry Tsai, Oliver Hofmann, Kevin G Becker, Myriam Gorospe, Winston Hide, Judy Lieberman.   

Abstract

miR-24, upregulated during terminal differentiation of multiple lineages, inhibits cell-cycle progression. Antagonizing miR-24 restores postmitotic cell proliferation and enhances fibroblast proliferation, whereas overexpressing miR-24 increases the G1 compartment. The 248 mRNAs downregulated upon miR-24 overexpression are highly enriched for DNA repair and cell-cycle regulatory genes that form a direct interaction network with prominent nodes at genes that enhance (MYC, E2F2, CCNB1, and CDC2) or inhibit (p27Kip1 and VHL) cell-cycle progression. miR-24 directly regulates MYC and E2F2 and some genes that they transactivate. Enhanced proliferation from antagonizing miR-24 is abrogated by knocking down E2F2, but not MYC, and cell proliferation, inhibited by miR-24 overexpression, is rescued by miR-24-insensitive E2F2. Therefore, E2F2 is a critical miR-24 target. The E2F2 3'UTR lacks a predicted miR-24 recognition element. In fact, miR-24 regulates expression of E2F2, MYC, AURKB, CCNA2, CDC2, CDK4, and FEN1 by recognizing seedless but highly complementary sequences.

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Year:  2009        PMID: 19748357      PMCID: PMC2757794          DOI: 10.1016/j.molcel.2009.08.020

Source DB:  PubMed          Journal:  Mol Cell        ISSN: 1097-2765            Impact factor:   17.970


  41 in total

1.  Identification of positively and negatively acting elements regulating expression of the E2F2 gene in response to cell growth signals.

Authors:  R Sears; K Ohtani; J R Nevins
Journal:  Mol Cell Biol       Date:  1997-09       Impact factor: 4.272

Review 2.  E2F target genes: unraveling the biology.

Authors:  Adrian P Bracken; Marco Ciro; Andrea Cocito; Kristian Helin
Journal:  Trends Biochem Sci       Date:  2004-08       Impact factor: 13.807

3.  Specificity of microRNA target selection in translational repression.

Authors:  John G Doench; Phillip A Sharp
Journal:  Genes Dev       Date:  2004-03-10       Impact factor: 11.361

4.  Conserved seed pairing, often flanked by adenosines, indicates that thousands of human genes are microRNA targets.

Authors:  Benjamin P Lewis; Christopher B Burge; David P Bartel
Journal:  Cell       Date:  2005-01-14       Impact factor: 41.582

5.  The lin-4 regulatory RNA controls developmental timing in Caenorhabditis elegans by blocking LIN-14 protein synthesis after the initiation of translation.

Authors:  P H Olsen; V Ambros
Journal:  Dev Biol       Date:  1999-12-15       Impact factor: 3.582

6.  The C. elegans microRNA let-7 binds to imperfect let-7 complementary sites from the lin-41 3'UTR.

Authors:  Monica C Vella; Eun-Young Choi; Shin-Yi Lin; Kristy Reinert; Frank J Slack
Journal:  Genes Dev       Date:  2004-01-16       Impact factor: 11.361

7.  Genomic targets of the human c-Myc protein.

Authors:  Paula C Fernandez; Scott R Frank; Luquan Wang; Marianne Schroeder; Suxing Liu; Jonathan Greene; Andrea Cocito; Bruno Amati
Journal:  Genes Dev       Date:  2003-04-14       Impact factor: 11.361

8.  miR-24-mediated downregulation of H2AX suppresses DNA repair in terminally differentiated blood cells.

Authors:  Ashish Lal; Yunfeng Pan; Francisco Navarro; Derek M Dykxhoorn; Lisa Moreau; Eti Meire; Zvi Bentwich; Judy Lieberman; Dipanjan Chowdhury
Journal:  Nat Struct Mol Biol       Date:  2009-04-19       Impact factor: 15.369

9.  Identification of target genes of the p16INK4A-pRB-E2F pathway.

Authors:  Richard Vernell; Kristian Helin; Heiko Müller
Journal:  J Biol Chem       Date:  2003-08-15       Impact factor: 5.157

10.  Prediction of mammalian microRNA targets.

Authors:  Benjamin P Lewis; I-hung Shih; Matthew W Jones-Rhoades; David P Bartel; Christopher B Burge
Journal:  Cell       Date:  2003-12-26       Impact factor: 41.582

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  328 in total

Review 1.  MicroRNAs, wild-type and mutant p53: more questions than answers.

Authors:  Matthew Jones; Ashish Lal
Journal:  RNA Biol       Date:  2012-06-01       Impact factor: 4.652

Review 2.  Shielding the messenger (RNA): microRNA-based anticancer therapies.

Authors:  Elena Sotillo; Andrei Thomas-Tikhonenko
Journal:  Pharmacol Ther       Date:  2011-04-14       Impact factor: 12.310

Review 3.  Aberrant epigenetic grooming of miRNAs in pancreatic cancer: a systems biology perspective.

Authors:  Asfar S Azmi; Frances W J Beck; Bin Bao; Ramzi M Mohammad; Fazlul H Sarkar
Journal:  Epigenomics       Date:  2011-12       Impact factor: 4.778

4.  Conserved microRNA targeting in Drosophila is as widespread in coding regions as in 3'UTRs.

Authors:  Michael Schnall-Levin; Yong Zhao; Norbert Perrimon; Bonnie Berger
Journal:  Proc Natl Acad Sci U S A       Date:  2010-08-20       Impact factor: 11.205

5.  Affinity purification of microRNA-133a with the cardiac transcription factor, Hand2.

Authors:  Ngan K Vo; Ryan P Dalton; Ning Liu; Eric N Olson; Richard H Goodman
Journal:  Proc Natl Acad Sci U S A       Date:  2010-10-25       Impact factor: 11.205

6.  miR-206 and -486 induce myoblast differentiation by downregulating Pax7.

Authors:  Bijan K Dey; Jeffrey Gagan; Anindya Dutta
Journal:  Mol Cell Biol       Date:  2010-11-01       Impact factor: 4.272

7.  Mir-24 regulates hepatocyte apoptosis via BIM during acute liver failure.

Authors:  Zhiwen Feng; Zhi Li; Deming Zhu; Wei Ling; Lei Zheng; Liyong Pu; Lianbao Kong
Journal:  Am J Transl Res       Date:  2017-11-15       Impact factor: 4.060

8.  Single nucleotide polymorphisms in microRNA binding sites of oncogenes: implications in cancer and pharmacogenomics.

Authors:  Mayakannan Manikandan; Arasambattu Kannan Munirajan
Journal:  OMICS       Date:  2013-11-28

Review 9.  MYC, Metabolism, and Cancer.

Authors:  Zachary E Stine; Zandra E Walton; Brian J Altman; Annie L Hsieh; Chi V Dang
Journal:  Cancer Discov       Date:  2015-09-17       Impact factor: 39.397

10.  STarMir Tools for Prediction of microRNA Binding Sites.

Authors:  Shaveta Kanoria; William Rennie; Chaochun Liu; C Steven Carmack; Jun Lu; Ye Ding
Journal:  Methods Mol Biol       Date:  2016
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