Literature DB >> 19747963

Independent and parallel lateral transfer of DNA transposons in tetrapod genomes.

Peter Novick1, Jeremy Smith, David Ray, Stéphane Boissinot.   

Abstract

In animals, the mode of transmission of transposable elements is generally vertical. However, recent studies have suggested that lateral transfer has occurred repeatedly in several distantly related tetrapod lineages, including mammals. Using transposons extracted from the genome of the lizard Anolis carolinensis as probes, we identified four novel families of hAT transposons that share extremely high similarity with elements in other genomes including several mammalian lineages (primates, chiropters, marsupials), one amphibian and one flatworm, the planarian Schmidtea mediterranea. The discontinuous phylogenetic distribution of these hAT families, coupled with very low synonymous divergence between species, strongly suggests that these elements were laterally transferred to these different species. This indicates that the horizontal transfer of DNA transposons in vertebrates might be more common than previously thought. Yet, it appears that the transfer of DNA transposons did not occur randomly as the same genomes have been invaded independently by different, unrelated transposon families whereas others seem to be immune to lateral transfer. This suggests that some organisms might be intrinsically more vulnerable to DNA transposon lateral transfer, possibly because of a weakened defense against transposons or because they have developed mechanisms to tolerate their impact.

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Year:  2009        PMID: 19747963     DOI: 10.1016/j.gene.2009.08.017

Source DB:  PubMed          Journal:  Gene        ISSN: 0378-1119            Impact factor:   3.688


  35 in total

1.  The transposable element profile of the anolis genome: How a lizard can provide insights into the evolution of vertebrate genome size and structure.

Authors:  Marc Tollis; Stéphane Boissinot
Journal:  Mob Genet Elements       Date:  2011-07-01

2.  The evolution of an ancient metazoan biomineralization strategy was supported by a horizontal gene transfer.

Authors:  Daniel J Jackson
Journal:  Mob Genet Elements       Date:  2011-09-01

3.  A role for host-parasite interactions in the horizontal transfer of transposons across phyla.

Authors:  Clément Gilbert; Sarah Schaack; John K Pace; Paul J Brindley; Cédric Feschotte
Journal:  Nature       Date:  2010-04-29       Impact factor: 49.962

Review 4.  Horizontal gene transfer in plants.

Authors:  Caihua Gao; Xiaodong Ren; Annaliese S Mason; Honglei Liu; Meili Xiao; Jiana Li; Donghui Fu
Journal:  Funct Integr Genomics       Date:  2013-10-17       Impact factor: 3.410

5.  Rampant horizontal transfer of SPIN transposons in squamate reptiles.

Authors:  Clément Gilbert; Sharon S Hernandez; Jaime Flores-Benabib; Eric N Smith; Cédric Feschotte
Journal:  Mol Biol Evol       Date:  2011-07-18       Impact factor: 16.240

Review 6.  Promiscuous DNA: horizontal transfer of transposable elements and why it matters for eukaryotic evolution.

Authors:  Sarah Schaack; Clément Gilbert; Cédric Feschotte
Journal:  Trends Ecol Evol       Date:  2010-06-28       Impact factor: 17.712

7.  Transposable elements and small RNAs: Genomic fuel for species diversity.

Authors:  Federico G Hoffmann; Liam P McGuire; Brian A Counterman; David A Ray
Journal:  Mob Genet Elements       Date:  2015-07-24

8.  A resurrected mammalian hAT transposable element and a closely related insect element are highly active in human cell culture.

Authors:  Xianghong Li; Hosam Ewis; Robert H Hice; Nirav Malani; Nicole Parker; Liqin Zhou; Cédric Feschotte; Frederic D Bushman; Peter W Atkinson; Nancy L Craig
Journal:  Proc Natl Acad Sci U S A       Date:  2012-10-22       Impact factor: 11.205

9.  Reading between the LINEs to see into the past.

Authors:  David A Ray; Roy N Platt; Mark A Batzer
Journal:  Trends Genet       Date:  2009-11       Impact factor: 11.639

10.  PiggyBac-ing on a primate genome: novel elements, recent activity and horizontal transfer.

Authors:  Heidi J T Pagan; Jeremy D Smith; Robert M Hubley; David A Ray
Journal:  Genome Biol Evol       Date:  2010-07-12       Impact factor: 3.416

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