Literature DB >> 19745369

An evolutionary approach to the representation of adverse events.

Werner Ceusters1, Maria Capolupo, Barry Smith, Georges De Moor.   

Abstract

One way to detect, monitor and prevent adverse events with the help of Information Technology is by using ontologies capable of representing three levels of reality: what is the case, what is believed about reality, and what is represented. We report on how Basic Formal Ontology and Referent Tracking exhibit this capability and how they are used to develop an adverse event ontology and related data annotation scheme for the European ReMINE project.

Entities:  

Mesh:

Year:  2009        PMID: 19745369      PMCID: PMC2829617     

Source DB:  PubMed          Journal:  Stud Health Technol Inform        ISSN: 0926-9630


  6 in total

1.  A reference ontology for biomedical informatics: the Foundational Model of Anatomy.

Authors:  Cornelius Rosse; José L V Mejino
Journal:  J Biomed Inform       Date:  2003-12       Impact factor: 6.317

2.  Biodynamic ontology: applying BFO in the biomedical domain.

Authors:  Pierre Grenon; Barry Smith; Louis Goldberg
Journal:  Stud Health Technol Inform       Date:  2004

3.  The OBO Foundry: coordinated evolution of ontologies to support biomedical data integration.

Authors:  Barry Smith; Michael Ashburner; Cornelius Rosse; Jonathan Bard; William Bug; Werner Ceusters; Louis J Goldberg; Karen Eilbeck; Amelia Ireland; Christopher J Mungall; Neocles Leontis; Philippe Rocca-Serra; Alan Ruttenberg; Susanna-Assunta Sansone; Richard H Scheuermann; Nigam Shah; Patricia L Whetzel; Suzanna Lewis
Journal:  Nat Biotechnol       Date:  2007-11       Impact factor: 54.908

4.  What particulars are referred to in Electronic Health Record data? A case study in integrating Referent Tracking into an EHR application.

Authors:  Ron Rudnicki; Werner Ceusters; Shahid Manzoor; Barry Smith
Journal:  AMIA Annu Symp Proc       Date:  2007-10-11

5.  Toward an ontological treatment of disease and diagnosis.

Authors:  Richard H Scheuermann; Werner Ceusters; Barry Smith
Journal:  Summit Transl Bioinform       Date:  2009-03-01

6.  Relations in biomedical ontologies.

Authors:  Barry Smith; Werner Ceusters; Bert Klagges; Jacob Köhler; Anand Kumar; Jane Lomax; Chris Mungall; Fabian Neuhaus; Alan L Rector; Cornelius Rosse
Journal:  Genome Biol       Date:  2005-04-28       Impact factor: 13.583

  6 in total
  4 in total

1.  Ontological realism: A methodology for coordinated evolution of scientific ontologies.

Authors:  Barry Smith; Werner Ceusters
Journal:  Appl Ontol       Date:  2010-11-15       Impact factor: 1.115

2.  The use of semantic distance metrics to support ontology audit.

Authors:  Jian Wang; Roger Day; Shyam Visweswaran; William Hogan
Journal:  AMIA Annu Symp Proc       Date:  2010-11-13

3.  Foundations for a realist ontology of mental disease.

Authors:  Werner Ceusters; Barry Smith
Journal:  J Biomed Semantics       Date:  2010-12-09

4.  A realism-based approach to an ontological representation of symbiotic interactions.

Authors:  Matthew Diller; Evan Johnson; Amanda Hicks; William R Hogan
Journal:  BMC Med Inform Decis Mak       Date:  2020-10-08       Impact factor: 2.796

  4 in total

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