Literature DB >> 19744688

In vitro incorporation of the phage Phi29 connector complex.

Chi-Yu Fu1, Peter E Prevelige.   

Abstract

The incorporation of the DNA packaging connector complex during lambdoid phage assembly in vivo is strictly controlled-one and only one of the twelve identical icosahedral vertices is differentiated by the inclusion of a portal or connector dodecamer. Proposed control mechanisms include obligate nucleation from a connector containing complex, addition of the connector as the final step during assembly, and a connector-mediated increase in the growth rate. The inability to recapitulate connector incorporation in vitro has made it difficult to obtain direct biochemical evidence in support of one model over another. Here we report the development an in vitro assembly system for the well characterized dsDNA phage Phi29 which results in the co-assembly of connector with capsid and scaffolding proteins to form procapsid-like particles (PLPs). Immuno-electron microscopy demonstrates the specific incorporation of connector vertex in PLPs. The connector protein increases both the yield and the rate of capsid assembly suggesting that the incorporation of the connector in Phi29 likely promotes nucleation of assembly.

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Year:  2009        PMID: 19744688      PMCID: PMC2767431          DOI: 10.1016/j.virol.2009.08.016

Source DB:  PubMed          Journal:  Virology        ISSN: 0042-6822            Impact factor:   3.616


  39 in total

1.  Structure of the bacteriophage phi29 DNA packaging motor.

Authors:  A A Simpson; Y Tao; P G Leiman; M O Badasso; Y He; P J Jardine; N H Olson; M C Morais; S Grimes; D L Anderson; T S Baker; M G Rossmann
Journal:  Nature       Date:  2000-12-07       Impact factor: 49.962

2.  In vitro packaging of DNA of the Bacillus subtilis bacteriophage SPP1.

Authors:  A Dröge; P Tavares
Journal:  J Mol Biol       Date:  2000-02-11       Impact factor: 5.469

Review 3.  Mechanism of scaffolding-assisted viral assembly.

Authors:  Bentley A Fane; Peter E Prevelige
Journal:  Adv Protein Chem       Date:  2003

Review 4.  Bacteriophage phi 29 DNA packaging.

Authors:  Shelley Grimes; Paul J Jardine; Dwight Anderson
Journal:  Adv Virus Res       Date:  2002       Impact factor: 9.937

5.  Structure of bacteriophage SPP1 head-to-tail connection reveals mechanism for viral DNA gating.

Authors:  Sophie Lhuillier; Matthieu Gallopin; Bernard Gilquin; Sandrine Brasilès; Nathalie Lancelot; Guillaume Letellier; Mathilde Gilles; Guillaume Dethan; Elena V Orlova; Joël Couprie; Paulo Tavares; Sophie Zinn-Justin
Journal:  Proc Natl Acad Sci U S A       Date:  2009-05-11       Impact factor: 11.205

6.  Bacteriophage p22 portal vertex formation in vivo.

Authors:  Sean D Moore; Peter E Prevelige
Journal:  J Mol Biol       Date:  2002-02-01       Impact factor: 5.469

7.  P22 morphogenesis. I: Catalytic scaffolding protein in capsid assembly.

Authors:  S Casjens; J King
Journal:  J Supramol Struct       Date:  1974

8.  Analysis of gene function of bacteriophage phi 29 of Bacillus subtilis: identification of cistrons essential for viral assembly.

Authors:  E W Hagen; B E Reilly; M E Tosi; D L Anderson
Journal:  J Virol       Date:  1976-08       Impact factor: 5.103

9.  The bacteriophage straight phi29 portal motor can package DNA against a large internal force.

Authors:  D E Smith; S J Tans; S B Smith; S Grimes; D L Anderson; C Bustamante
Journal:  Nature       Date:  2001-10-18       Impact factor: 49.962

10.  Assembly of Bacillus subtilis phage phi29. 1. Mutants in the cistrons coding for the structural proteins.

Authors:  A Camacho; F Jiménez; J De La Torre; J L Carrascosa; R P Mellado; C Vásquez; E Viñuela; M Salas
Journal:  Eur J Biochem       Date:  1977-02-15
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  23 in total

1.  Cryo-electron tomography of bacteriophage phi6 procapsids shows random occupancy of the binding sites for RNA polymerase and packaging NTPase.

Authors:  Daniel Nemecek; J Bernard Heymann; Jian Qiao; Leonard Mindich; Alasdair C Steven
Journal:  J Struct Biol       Date:  2010-06-09       Impact factor: 2.867

2.  A docking model based on mass spectrometric and biochemical data describes phage packaging motor incorporation.

Authors:  Chi-yu Fu; Charlotte Uetrecht; Sebyung Kang; Marc C Morais; Albert J R Heck; Mark R Walter; Peter E Prevelige
Journal:  Mol Cell Proteomics       Date:  2010-02-02       Impact factor: 5.911

3.  Capsids and Portals Influence Each Other's Conformation During Assembly and Maturation.

Authors:  Joshua B Maurer; Bonnie Oh; Crystal L Moyer; Robert L Duda
Journal:  J Mol Biol       Date:  2020-02-06       Impact factor: 5.469

4.  Intracellular assembly of cyanophage Syn5 proceeds through a scaffold-containing procapsid.

Authors:  Desislava A Raytcheva; Cameron Haase-Pettingell; Jacqueline M Piret; Jonathan A King
Journal:  J Virol       Date:  2010-12-22       Impact factor: 5.103

5.  Three reversible and controllable discrete steps of channel gating of a viral DNA packaging motor.

Authors:  Jia Geng; Huaming Fang; Farzin Haque; Le Zhang; Peixuan Guo
Journal:  Biomaterials       Date:  2011-07-31       Impact factor: 12.479

Review 6.  Nature's favorite building block: Deciphering folding and capsid assembly of proteins with the HK97-fold.

Authors:  Margaret M Suhanovsky; Carolyn M Teschke
Journal:  Virology       Date:  2015-04-08       Impact factor: 3.616

7.  Cryo-reconstructions of P22 polyheads suggest that phage assembly is nucleated by trimeric interactions among coat proteins.

Authors:  Kristin N Parent; Robert S Sinkovits; Margaret M Suhanovsky; Carolyn M Teschke; Edward H Egelman; Timothy S Baker
Journal:  Phys Biol       Date:  2010-12-09       Impact factor: 2.583

8.  Correct Assembly of the Bacteriophage T5 Procapsid Requires Both the Maturation Protease and the Portal Complex.

Authors:  Alexis Huet; Robert L Duda; Roger W Hendrix; Pascale Boulanger; James F Conway
Journal:  J Mol Biol       Date:  2015-11-23       Impact factor: 5.469

9.  Channel size conversion of Phi29 DNA-packaging nanomotor for discrimination of single- and double-stranded nucleic acids.

Authors:  Jia Geng; Shaoying Wang; Huaming Fang; Peixuan Guo
Journal:  ACS Nano       Date:  2013-03-25       Impact factor: 15.881

10.  Solid-State and Biological Nanopore for Real-Time Sensing of Single Chemical and Sequencing of DNA.

Authors:  Farzin Haque; Jinghong Li; Hai-Chen Wu; Xing-Jie Liang; Peixuan Guo
Journal:  Nano Today       Date:  2013-02       Impact factor: 20.722

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