Literature DB >> 19731251

Engineering of a high-throughput screening system to identify cellulosic biomass, pretreatments, and enzyme formulations that enhance sugar release.

Michael H Studer1, Jaclyn D DeMartini, Simone Brethauer, Heather L McKenzie, Charles E Wyman.   

Abstract

The recalcitrance of cellulosic biomass, the only abundant, sustainable feedstock for making liquid fuels, is a primary obstacle to low cost biological processing, and development of more easily converted plants and more effective enzymes would be of great benefit. Because no single parameter describes recalcitrance, superior variants can only be identified by measuring sugar release from plants subjected to pretreatment and enzymatic hydrolysis. However, genetic modifications of plants coupled with molecular engineering of deconstruction proteins and definition of pretreatment conditions create a very large sample set, and previous methods for biomass pretreatment at elevated temperatures and pressures prevented use of a fully integrated high-throughput (HTP) screening pipeline. Herein, we report on the engineering of a novel HTP pretreatment system employing a 96 well-plate format that withstands extreme pretreatment conditions for rapid screening of biomass-enzyme-pretreatment combinations. This includes the development of new approaches to steam heating and water quenching the system that result in much faster heat up and cool down than previously possible and show consistent temperature histories across the multiwell plate. Coupled pretreatment and enzymatic hydrolysis performance of the well plate pretreatment system is shown to be consistent among the many wells in the device and also with performance of conventional tubular reactors. 2009 Wiley Periodicals, Inc.

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Year:  2010        PMID: 19731251     DOI: 10.1002/bit.22527

Source DB:  PubMed          Journal:  Biotechnol Bioeng        ISSN: 0006-3592            Impact factor:   4.530


  25 in total

1.  Lignin content in natural Populus variants affects sugar release.

Authors:  Michael H Studer; Jaclyn D DeMartini; Mark F Davis; Robert W Sykes; Brian Davison; Martin Keller; Gerald A Tuskan; Charles E Wyman
Journal:  Proc Natl Acad Sci U S A       Date:  2011-03-28       Impact factor: 11.205

2.  High-throughput Screening of Recalcitrance Variations in Lignocellulosic Biomass: Total Lignin, Lignin Monomers, and Enzymatic Sugar Release.

Authors:  Stephen R Decker; Robert W Sykes; Geoffrey B Turner; Jason S Lupoi; Crissa Doepkke; Melvin P Tucker; Logan A Schuster; Kimberly Mazza; Michael E Himmel; Mark F Davis; Erica Gjersing
Journal:  J Vis Exp       Date:  2015-09-15       Impact factor: 1.355

3.  Sugar release and growth of biofuel crops are improved by downregulation of pectin biosynthesis.

Authors:  Ajaya K Biswal; Melani A Atmodjo; Mi Li; Holly L Baxter; Chang Geun Yoo; Yunqiao Pu; Yi-Ching Lee; Mitra Mazarei; Ian M Black; Ji-Yi Zhang; Hema Ramanna; Adam L Bray; Zachary R King; Peter R LaFayette; Sivakumar Pattathil; Bryon S Donohoe; Sushree S Mohanty; David Ryno; Kelsey Yee; Olivia A Thompson; Miguel Rodriguez; Alexandru Dumitrache; Jace Natzke; Kim Winkeler; Cassandra Collins; Xiaohan Yang; Li Tan; Robert W Sykes; Erica L Gjersing; Angela Ziebell; Geoffrey B Turner; Stephen R Decker; Michael G Hahn; Brian H Davison; Michael K Udvardi; Jonathan R Mielenz; Mark F Davis; Richard S Nelson; Wayne A Parrott; Arthur J Ragauskas; C Neal Stewart; Debra Mohnen
Journal:  Nat Biotechnol       Date:  2018-02-12       Impact factor: 54.908

4.  4-O-methylation of glucuronic acid in Arabidopsis glucuronoxylan is catalyzed by a domain of unknown function family 579 protein.

Authors:  Breeanna R Urbanowicz; Maria J Peña; Supriya Ratnaparkhe; Utku Avci; Jason Backe; Heather F Steet; Marcus Foston; Hongjia Li; Malcolm A O'Neill; Arthur J Ragauskas; Alan G Darvill; Charles Wyman; Harry J Gilbert; William S York
Journal:  Proc Natl Acad Sci U S A       Date:  2012-08-14       Impact factor: 11.205

5.  Cellulosic ethanol: interactions between cultivar and enzyme loading in wheat straw processing.

Authors:  Jane Lindedam; Sander Bruun; Henning Jørgensen; Claus Felby; Jakob Magid
Journal:  Biotechnol Biofuels       Date:  2010-11-18       Impact factor: 6.040

6.  Chromatographic determination of 1, 4-β-xylooligosaccharides of different chain lengths to follow xylan deconstruction in biomass conversion.

Authors:  Hongjia Li; Qing Qing; Rajeev Kumar; Charles E Wyman
Journal:  J Ind Microbiol Biotechnol       Date:  2013-03-19       Impact factor: 3.346

7.  Natural genetic variability reduces recalcitrance in poplar.

Authors:  Samarthya Bhagia; Wellington Muchero; Rajeev Kumar; Gerald A Tuskan; Charles E Wyman
Journal:  Biotechnol Biofuels       Date:  2016-05-20       Impact factor: 6.040

8.  Breeding for dual-purpose wheat varieties using marker-trait associations for biomass yield and quality traits.

Authors:  Pernille L Malik; Luc Janss; Linda K Nielsen; Finn Borum; Henning Jørgensen; Birger Eriksen; Jan K Schjoerring; Søren K Rasmussen
Journal:  Theor Appl Genet       Date:  2019-09-25       Impact factor: 5.699

9.  Biological conversion assay using Clostridium phytofermentans to estimate plant feedstock quality.

Authors:  Scott J Lee; Thomas A Warnick; Sivakumar Pattathil; Jesús G Alvelo-Maurosa; Michelle J Serapiglia; Heather McCormick; Virginia Brown; Naomi F Young; Danny J Schnell; Lawrence B Smart; Michael G Hahn; Jeffrey F Pedersen; Susan B Leschine; Samuel P Hazen
Journal:  Biotechnol Biofuels       Date:  2012-02-08       Impact factor: 6.040

10.  Rapid selection and identification of Miscanthus genotypes with enhanced glucan and xylan yields from hydrothermal pretreatment followed by enzymatic hydrolysis.

Authors:  Taiying Zhang; Charles E Wyman; Katrin Jakob; Bin Yang
Journal:  Biotechnol Biofuels       Date:  2012-08-03       Impact factor: 6.040

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