Literature DB >> 19728138

Spin labeling EPR.

Johann P Klare1, Heinz-Jürgen Steinhoff.   

Abstract

Site-directed spin labeling in combination with electron paramagnetic resonance spectroscopy has emerged as an efficient tool to elucidate the structure and conformational dynamics of biomolecules under native-like conditions. This article summarizes the basics as well as recent progress of site-directed spin labeling. Continuous wave EPR spectra analyses and pulse EPR techniques are reviewed with special emphasis on applications to the sensory rhodopsin-transducer complex mediating the photophobic response of the halophilic archaeum Natronomonas pharaonis and the photosynthetic reaction center from Rhodobacter sphaeroides R26. © Springer Science+Business Media B.V. 2009

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Year:  2009        PMID: 19728138     DOI: 10.1007/s11120-009-9490-7

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  89 in total

Review 1.  A new spin on protein dynamics.

Authors:  Linda Columbus; Wayne L Hubbell
Journal:  Trends Biochem Sci       Date:  2002-06       Impact factor: 13.807

2.  Monitoring RNA base structure and dynamics using site-directed spin labeling.

Authors:  Peter Z Qin; Kálmán Hideg; Juli Feigon; Wayne L Hubbell
Journal:  Biochemistry       Date:  2003-06-10       Impact factor: 3.162

3.  Localization of the N-terminal domain in light-harvesting chlorophyll a/b protein by EPR measurements.

Authors:  Gunnar Jeschke; Alexander Bender; Thorsten Schweikardt; Grazyna Panek; Heinz Decker; Harald Paulsen
Journal:  J Biol Chem       Date:  2005-03-08       Impact factor: 5.157

4.  Relaxation-based distance measurements between a nitroxide and a lanthanide spin label.

Authors:  H Jäger; A Koch; V Maus; H W Spiess; G Jeschke
Journal:  J Magn Reson       Date:  2008-07-18       Impact factor: 2.229

5.  Two dimensional diffusion of small molecules on protein surfaces: an EPR study of the restricted translational diffusion of protein-bound spin labels.

Authors:  O Dombrowsky; C Karin; C Schneiderhahn
Journal:  Eur Biophys J       Date:  1991       Impact factor: 1.733

6.  High-field EPR studies of the structure and conformational changes of site-directed spin labeled bacteriorhodopsin.

Authors:  H Steinhoff; A Savitsky; C Wegener; M Pfeiffer; M Plato; K Möbius
Journal:  Biochim Biophys Acta       Date:  2000-04-21

Review 7.  Site-directed mutagenesis with an expanded genetic code.

Authors:  D Mendel; V W Cornish; P G Schultz
Journal:  Annu Rev Biophys Biomol Struct       Date:  1995

8.  Lateral diffusion of lipids in membranes by pulse saturation recovery electron spin resonance.

Authors:  J J Yin; M Pasenkiewicz-Gierula; J S Hyde
Journal:  Proc Natl Acad Sci U S A       Date:  1987-02       Impact factor: 11.205

9.  Structure and dynamics of a helical hairpin and loop region in annexin 12: a site-directed spin labeling study.

Authors:  J Mario Isas; Ralf Langen; Harry T Haigler; Wayne L Hubbell
Journal:  Biochemistry       Date:  2002-02-05       Impact factor: 3.162

10.  Sequence- and structure-dependent DNA base dynamics: synthesis, structure, and dynamics of site and sequence specifically spin-labeled DNA.

Authors:  A Spaltenstein; B H Robinson; P B Hopkins
Journal:  Biochemistry       Date:  1989-11-28       Impact factor: 3.162

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  57 in total

1.  Conformational changes in BAK, a pore-forming proapoptotic Bcl-2 family member, upon membrane insertion and direct evidence for the existence of BH3-BH3 contact interface in BAK homo-oligomers.

Authors:  Kyoung Joon Oh; Pawan Singh; Kyungro Lee; Kelly Foss; Shinyoub Lee; Minji Park; Steffi Lee; Sreevidya Aluvila; Matthew Park; Puja Singh; Ryung-Suk Kim; Jindrich Symersky; D Eric Walters
Journal:  J Biol Chem       Date:  2010-07-06       Impact factor: 5.157

2.  Solvent effect on librational dynamics of spin-labelled haemoglobin by ED- and CW-EPR.

Authors:  Francesco Scarpelli; Rosa Bartucci; Luigi Sportelli; Rita Guzzi
Journal:  Eur Biophys J       Date:  2010-11-25       Impact factor: 1.733

3.  Doubly Spin-Labeled RNA as an EPR Reporter for Studying Multicomponent Supramolecular Assemblies.

Authors:  Alexey A Malygin; Dmitri M Graifer; Maria I Meschaninova; Aliya G Venyaminova; Olesya A Krumkacheva; Matvey V Fedin; Galina G Karpova; Elena G Bagryanskaya
Journal:  Biophys J       Date:  2015-12-15       Impact factor: 4.033

4.  Domain movements during CCA-addition: a new function for motif C in the catalytic core of the human tRNA nucleotidyltransferases.

Authors:  Felix G M Ernst; Christian Rickert; Alexander Bluschke; Heike Betat; Heinz-Jürgen Steinhoff; Mario Mörl
Journal:  RNA Biol       Date:  2015       Impact factor: 4.652

5.  Distance measurements in the F0F1-ATP synthase from E. coli using smFRET and PELDOR spectroscopy.

Authors:  Markus Burger; Stephan Rein; Stefan Weber; Peter Gräber; Sylwia Kacprzak
Journal:  Eur Biophys J       Date:  2019-11-08       Impact factor: 1.733

6.  Taking the pulse of protein interactions by EPR spectroscopy.

Authors:  David S Cafiso
Journal:  Biophys J       Date:  2012-11-20       Impact factor: 4.033

7.  Site Directed Spin Labeling and EPR Spectroscopic Studies of Pentameric Ligand-Gated Ion Channels.

Authors:  Sandip Basak; Soumili Chatterjee; Sudha Chakrapani
Journal:  J Vis Exp       Date:  2016-07-04       Impact factor: 1.355

8.  Navigating Membrane Protein Structure, Dynamics, and Energy Landscapes Using Spin Labeling and EPR Spectroscopy.

Authors:  Derek P Claxton; Kelli Kazmier; Smriti Mishra; Hassane S Mchaourab
Journal:  Methods Enzymol       Date:  2015-08-29       Impact factor: 1.600

9.  Enhancement of electron spin echo envelope modulation spectroscopic methods to investigate the secondary structure of membrane proteins.

Authors:  Lishan Liu; Indra D Sahu; Daniel J Mayo; Robert M McCarrick; Kaylee Troxel; Andy Zhou; Erin Shockley; Gary A Lorigan
Journal:  J Phys Chem B       Date:  2012-08-30       Impact factor: 2.991

10.  Orthogonal spin labeling and Gd(III)-nitroxide distance measurements on bacteriophage T4-lysozyme.

Authors:  Luca Garbuio; Enrica Bordignon; Evan K Brooks; Wayne L Hubbell; Gunnar Jeschke; Maxim Yulikov
Journal:  J Phys Chem B       Date:  2013-03-08       Impact factor: 2.991

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