Literature DB >> 19725633

Theoretically informed coarse grain simulations of polymeric systems.

Darin Q Pike1, François A Detcheverry, Marcus Müller, Juan J de Pablo.   

Abstract

A Monte Carlo formalism for the study of polymeric melts is described. The model is particle-based, but the interaction is derived from a local density functional that appears in the field-based model. The method enables Monte Carlo simulations in the nVT, nPT, semigrandcanonical and Gibbs ensembles, and direct calculation of free energies. The approach is illustrated in the context of two examples. In the first, we consider the phase separation of a binary homopolymer blend and present results for the phase diagram and the critical point. In the second, we address the microphase separation of a symmetric diblock copolymer, examine the distribution of local stresses in lamellae, and determine the order-disorder transition temperature.

Entities:  

Year:  2009        PMID: 19725633     DOI: 10.1063/1.3187936

Source DB:  PubMed          Journal:  J Chem Phys        ISSN: 0021-9606            Impact factor:   3.488


  7 in total

1.  Physical modeling of the heritability and maintenance of epigenetic modifications.

Authors:  Sarah H Sandholtz; Quinn MacPherson; Andrew J Spakowitz
Journal:  Proc Natl Acad Sci U S A       Date:  2020-08-10       Impact factor: 11.205

2.  Complex Coacervation in Polyelectrolytes from a Coarse-Grained Model.

Authors:  Marat Andreev; Vivek M Prabhu; Jack F Douglas; Matthew Tirrell; Juan J de Pablo
Journal:  ACS Macro Lett       Date:  2018       Impact factor: 6.903

3.  Impact of chromosomal organization on epigenetic drift and domain stability revealed by physics-based simulations.

Authors:  Joseph G Wakim; Sarah H Sandholtz; Andrew J Spakowitz
Journal:  Biophys J       Date:  2021-10-21       Impact factor: 4.033

4.  Chromatin Compaction Leads to a Preference for Peripheral Heterochromatin.

Authors:  Quinn MacPherson; Bruno Beltran; Andrew J Spakowitz
Journal:  Biophys J       Date:  2020-02-04       Impact factor: 4.033

5.  Molecular Modeling of EUV Photoresist Revealing the Effect of Chain Conformation on Line-Edge Roughness Formation.

Authors:  Juhae Park; Sung-Gyu Lee; Yannick Vesters; Joren Severi; Myungwoong Kim; Danilo De Simone; Hye-Keun Oh; Su-Mi Hur
Journal:  Polymers (Basel)       Date:  2019-11-22       Impact factor: 4.329

6.  Slip-spring simulations of different constraint release environments for linear polymer chains.

Authors:  Teng Ma; Guochang Lin; Huifeng Tan
Journal:  R Soc Open Sci       Date:  2020-03-18       Impact factor: 2.963

7.  Mesoscale Simulations of Polymer Solution Self-Assembly: Selection of Model Parameters within an Implicit Solvent Approximation.

Authors:  Juhae Park; Abelardo Ramírez-Hernández; Vikram Thapar; Su-Mi Hur
Journal:  Polymers (Basel)       Date:  2021-03-19       Impact factor: 4.329

  7 in total

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