Literature DB >> 19722675

The building blocks of cellulose: the intrinsic conformational structures of cellobiose, its epimer, lactose, and their singly hydrated complexes.

Emilio J Cocinero1, David P Gamblin, Benjamin G Davis, John P Simons.   

Abstract

A combination of vibrational spectroscopy conducted under molecular beam conditions and quantum chemical calculation has established the intrinsic three-dimensional structures of the cellulose disaccharide and, focusing on the critical beta1,4-linkage at the nonreducing end of the growing cellulose polymer, its C-4' epimer. Left to their own devices they both adopt a cis (anti-phi/syn-psi) glycosidic configuration, supported in the epimer by strong, cooperative inter-ring hydrogen bonding. In the cellulose disaccharide, however, where the OH-4'(Glc) group is equatorial, the cooperativity is reduced and the corresponding inter-ring hydrogen bonding is relatively weak. The cis conformational preference is still retained in their singly hydrated complexes. In the cellulose disaccharide insertion of the water molecule at the favored binding site between OH-4' and the neighboring hydroxyl group OH-6' promotes a structural reorganization to create a configuration that parallels that of its unhydrated epimer and greatly strengthens the inter-ring hydrogen bonding. In the C-4' epimer, the axial orientation of OH-4' blocks this binding site and the bound water molecule simply adds on at the end of the (OH-O)(n) chain, which has a negligible effect on the (already strong) inter-ring bonding. The implications of these results are discussed with respect to the structure and insolubility of native cellulose polymers.

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Year:  2009        PMID: 19722675     DOI: 10.1021/ja903322w

Source DB:  PubMed          Journal:  J Am Chem Soc        ISSN: 0002-7863            Impact factor:   15.419


  8 in total

1.  Thermochemistry of microhydration of sodiated and potassiated monosaccharides.

Authors:  Henryk Wincel
Journal:  J Am Soc Mass Spectrom       Date:  2011-06-23       Impact factor: 3.109

2.  Intramolecular hydrogen-bonding in aqueous carbohydrates as a cause or consequence of conformational preferences: a molecular dynamics study of cellobiose stereoisomers.

Authors:  Dongqi Wang; Maria Lovísa Ámundadóttir; Wilfred F van Gunsteren; Philippe H Hünenberger
Journal:  Eur Biophys J       Date:  2013-05-10       Impact factor: 1.733

Review 3.  Lignocellulose degradation: An overview of fungi and fungal enzymes involved in lignocellulose degradation.

Authors:  Martina Andlar; Tonči Rezić; Nenad Marđetko; Daniel Kracher; Roland Ludwig; Božidar Šantek
Journal:  Eng Life Sci       Date:  2018-06-27       Impact factor: 3.405

4.  'Naked' and hydrated conformers of the conserved core pentasaccharide of N-linked glycoproteins and its building blocks.

Authors:  Conor S Barry; Emilio J Cocinero; Pierre Carçabal; David P Gamblin; E Cristina Stanca-Kaposta; Sarah M Remmert; María C Fernández-Alonso; Svemir Rudić; John P Simons; Benjamin G Davis
Journal:  J Am Chem Soc       Date:  2013-11-01       Impact factor: 15.419

5.  Discovery and characterization of a thermostable two-domain GH6 endoglucanase from a compost metagenome.

Authors:  Marianne S Jensen; Lasse Fredriksen; Alasdair K MacKenzie; Phillip B Pope; Ingar Leiros; Piotr Chylenski; Adele K Williamson; Tony Christopeit; Heidi Østby; Gustav Vaaje-Kolstad; Vincent G H Eijsink
Journal:  PLoS One       Date:  2018-05-24       Impact factor: 3.240

6.  Metagenomics-Based, Strain-Level Analysis of Escherichia coli From a Time-Series of Microbiome Samples From a Crohn's Disease Patient.

Authors:  Xin Fang; Jonathan M Monk; Sergey Nurk; Margarita Akseshina; Qiyun Zhu; Christopher Gemmell; Connor Gianetto-Hill; Nelly Leung; Richard Szubin; Jon Sanders; Paul L Beck; Weizhong Li; William J Sandborn; Scott D Gray-Owen; Rob Knight; Emma Allen-Vercoe; Bernhard O Palsson; Larry Smarr
Journal:  Front Microbiol       Date:  2018-10-30       Impact factor: 5.640

7.  Role of cellulose family in fibril organization of collagen for forming 3D cancer spheroids: In vitro and in silico approach.

Authors:  Elaheh Dalir Abdolahinia; Behzad Jafari; Sepideh Parvizpour; Jaleh Barar; Samad Nadri; Yadollah Omidi
Journal:  Bioimpacts       Date:  2020-11-02

8.  Synthesis and Comparative Structure-Activity Study of Carbohydrate-Based Phenolic Compounds as α-Glucosidase Inhibitors and Antioxidants.

Authors:  Shota Machida; Saki Mukai; Rina Kono; Megumi Funato; Hiroaki Saito; Taketo Uchiyama
Journal:  Molecules       Date:  2019-11-27       Impact factor: 4.411

  8 in total

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