Literature DB >> 19720519

Chemical synthesis using synthetic biology.

James M Carothers1, Jonathan A Goler, Jay D Keasling.   

Abstract

An immense array of naturally occurring biological systems have evolved that convert simple substrates into the products that cells need for growth and persistence. Through the careful application of metabolic engineering and synthetic biology, this biotransformation potential can be harnessed to produce chemicals that address unmet clinical and industrial needs. Developing the capacity to utilize biology to perform chemistry is a matter of increasing control over both the function of synthetic biological systems and the engineering of those systems. Recent efforts have improved general techniques and yielded successes in the use of synthetic biology for the production of drugs, bulk chemicals, and fuels in microbial platform hosts. Synthetic promoter systems and novel RNA-based, or riboregulator, mechanisms give more control over gene expression. Improved methods for isolating, engineering, and evolving enzymes give more control over substrate and product specificity and better catalysis inside the cell. New computational tools and methods for high-throughput system assembly and analysis may lead to more rapid forward engineering. We highlight research that reduces reliance upon natural biological components and point to future work that may enable more rational design and assembly of synthetic biological systems for synthetic chemistry.

Mesh:

Year:  2009        PMID: 19720519     DOI: 10.1016/j.copbio.2009.08.001

Source DB:  PubMed          Journal:  Curr Opin Biotechnol        ISSN: 0958-1669            Impact factor:   9.740


  27 in total

Review 1.  Microbial electrosynthesis - revisiting the electrical route for microbial production.

Authors:  Korneel Rabaey; René A Rozendal
Journal:  Nat Rev Microbiol       Date:  2010-10       Impact factor: 60.633

2.  Biosynthesis: is it time to go retro?

Authors:  Brian O Bachmann
Journal:  Nat Chem Biol       Date:  2010-06       Impact factor: 15.040

3.  Build life to understand it.

Authors:  Michael Elowitz; Wendell A Lim
Journal:  Nature       Date:  2010-12-16       Impact factor: 49.962

4.  Multifactorial determinants of protein expression in prokaryotic open reading frames.

Authors:  Malin Allert; J Colin Cox; Homme W Hellinga
Journal:  J Mol Biol       Date:  2010-08-18       Impact factor: 5.469

5.  Pathway mining-based integration of critical enzyme parts for de novo biosynthesis of steviolglycosides sweetener in Escherichia coli.

Authors:  Jianfeng Wang; Shiyuan Li; Zhiqiang Xiong; Yong Wang
Journal:  Cell Res       Date:  2015-09-11       Impact factor: 25.617

6.  Design-driven, multi-use research agendas to enable applied synthetic biology for global health.

Authors:  James M Carothers
Journal:  Syst Synth Biol       Date:  2013-07-20

7.  Selecting RNA aptamers for synthetic biology: investigating magnesium dependence and predicting binding affinity.

Authors:  James M Carothers; Jonathan A Goler; Yuvraaj Kapoor; Lesley Lara; Jay D Keasling
Journal:  Nucleic Acids Res       Date:  2010-02-16       Impact factor: 16.971

Review 8.  Biology by design: from top to bottom and back.

Authors:  Brian R Fritz; Laura E Timmerman; Nichole M Daringer; Joshua N Leonard; Michael C Jewett
Journal:  J Biomed Biotechnol       Date:  2010-11-02

Review 9.  Opportunities for merging chemical and biological synthesis.

Authors:  Stephen Wallace; Emily P Balskus
Journal:  Curr Opin Biotechnol       Date:  2014-04-18       Impact factor: 9.740

Review 10.  The path to next generation biofuels: successes and challenges in the era of synthetic biology.

Authors:  Clementina Dellomonaco; Fabio Fava; Ramon Gonzalez
Journal:  Microb Cell Fact       Date:  2010-01-20       Impact factor: 5.328

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