Literature DB >> 19720015

A RasGTP-induced conformational change in C-RAF is essential for accurate molecular recognition.

Kayo Hibino1, Tatsuo Shibata, Toshio Yanagida, Yasushi Sako.   

Abstract

The dysregulation of Ras-RAF signaling is associated with many types of human cancer. However, the kinetic and dynamic features of the mutual molecular recognition of Ras and RAF remain unknown. Here, we developed a technique for imaging single-pair fluorescence resonance energy transfer in living cells, and coupled this technique to single-molecule kinetic analysis to investigate how C-RAF (a subtype of RAF) molecules distinguish the active form of Ras (RasGTP) from the inactive form (RasGDP). Functional fragments of C-RAF containing the Ras-binding domains did not detect the switch in Ras activity in living cells as efficiently as did C-RAF. Single-molecule analysis showed that RasGDP associates with closed-conformation C-RAF, whereas the association of C-RAF with RasGTP immediately triggers the open RAF conformation, which induces an effective interaction between C-RAF and RasGTP. Spontaneous conformational changes from closed C-RAF to the open form rarely occur in quiescent cells. The conformational change in C-RAF is so important to Ras-RAF molecular recognition that C-RAF mutants lacking the conformational change cannot distinguish between RasGDP and RasGTP. The manipulation of the conformation of an effector molecule is a newly identified function of RasGTP.

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Year:  2009        PMID: 19720015      PMCID: PMC3325157          DOI: 10.1016/j.bpj.2009.05.048

Source DB:  PubMed          Journal:  Biophys J        ISSN: 0006-3495            Impact factor:   4.033


  41 in total

Review 1.  Meaningful relationships: the regulation of the Ras/Raf/MEK/ERK pathway by protein interactions.

Authors:  W Kolch
Journal:  Biochem J       Date:  2000-10-15       Impact factor: 3.857

2.  Ras signalling on the endoplasmic reticulum and the Golgi.

Authors:  Vi K Chiu; Trever Bivona; Angela Hach; J Bernard Sajous; Joseph Silletti; Heidi Wiener; Ronald L Johnson; Adrienne D Cox; Mark R Philips
Journal:  Nat Cell Biol       Date:  2002-05       Impact factor: 28.824

3.  Partitioning of lipid-modified monomeric GFPs into membrane microdomains of live cells.

Authors:  David A Zacharias; Jonathan D Violin; Alexandra C Newton; Roger Y Tsien
Journal:  Science       Date:  2002-05-03       Impact factor: 47.728

4.  Spatio-temporal images of growth-factor-induced activation of Ras and Rap1.

Authors:  N Mochizuki; S Yamashita; K Kurokawa; Y Ohba; T Nagai; A Miyawaki; M Matsuda
Journal:  Nature       Date:  2001-06-28       Impact factor: 49.962

5.  Regulation of a novel human phospholipase C, PLCepsilon, through membrane targeting by Ras.

Authors:  C Song; C D Hu; M Masago; K Kariyai; Y Yamawaki-Kataoka; M Shibatohge; D Wu; T Satoh; T Kataoka
Journal:  J Biol Chem       Date:  2000-10-05       Impact factor: 5.157

6.  Lateral propagation of EGF signaling after local stimulation is dependent on receptor density.

Authors:  Asako Sawano; Shuichi Takayama; Michiyuki Matsuda; Atsushi Miyawaki
Journal:  Dev Cell       Date:  2002-08       Impact factor: 12.270

7.  Structural determinants of Ras-Raf interaction analyzed in live cells.

Authors:  Tzvetanka Bondeva; András Balla; Péter Várnai; Tamas Balla
Journal:  Mol Biol Cell       Date:  2002-07       Impact factor: 4.138

Review 8.  Ras proteins: different signals from different locations.

Authors:  John F Hancock
Journal:  Nat Rev Mol Cell Biol       Date:  2003-05       Impact factor: 94.444

9.  Single-molecule imaging of fluorescent proteins expressed in living cells.

Authors:  Kayo Hibino; Michio Hiroshima; Masahiro Takahashi; Yasushi Sako
Journal:  Methods Mol Biol       Date:  2009

Review 10.  Targeting RAS signalling pathways in cancer therapy.

Authors:  Julian Downward
Journal:  Nat Rev Cancer       Date:  2003-01       Impact factor: 60.716

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  15 in total

Review 1.  Mechanistic principles of RAF kinase signaling.

Authors:  Christian M Udell; Thanashan Rajakulendran; Frank Sicheri; Marc Therrien
Journal:  Cell Mol Life Sci       Date:  2010-09-06       Impact factor: 9.261

2.  Variational Bayes analysis of a photon-based hidden Markov model for single-molecule FRET trajectories.

Authors:  Kenji Okamoto; Yasushi Sako
Journal:  Biophys J       Date:  2012-09-19       Impact factor: 4.033

3.  Activation kinetics of RAF protein in the ternary complex of RAF, RAS-GTP, and kinase on the plasma membrane of living cells: single-molecule imaging analysis.

Authors:  Kayo Hibino; Tatsuo Shibata; Toshio Yanagida; Yasushi Sako
Journal:  J Biol Chem       Date:  2011-08-23       Impact factor: 5.157

Review 4.  Ras-Mediated Activation of the Raf Family Kinases.

Authors:  Elizabeth M Terrell; Deborah K Morrison
Journal:  Cold Spring Harb Perspect Med       Date:  2019-01-02       Impact factor: 6.915

Review 5.  Single-Molecular Förster Resonance Energy Transfer Measurement on Structures and Interactions of Biomolecules.

Authors:  Yi Qiao; Yuhan Luo; Naiyun Long; Yi Xing; Jing Tu
Journal:  Micromachines (Basel)       Date:  2021-04-27       Impact factor: 2.891

6.  Dynamics of Ras complexes observed in living cells.

Authors:  Xiangyong Li; Zhiyong Cheng; Honglin Jin
Journal:  Sensors (Basel)       Date:  2012-07-09       Impact factor: 3.576

7.  Live-cell microscopy reveals small molecule inhibitor effects on MAPK pathway dynamics.

Authors:  Daniel J Anderson; Jenni K Durieux; Kyung Song; Ryan Alvarado; Peter K Jackson; Georgia Hatzivassiliou; Mary J C Ludlam
Journal:  PLoS One       Date:  2011-08-04       Impact factor: 3.240

8.  The significance of membrane fluidity of feeder cell-derived substrates for maintenance of iPS cell stemness.

Authors:  Yue Zhou; Hongli Mao; Binata Joddar; Nobuhisa Umeki; Yasushi Sako; Ken-Ichi Wada; Chieko Nishioka; Eiki Takahashi; Yi Wang; Yoshihiro Ito
Journal:  Sci Rep       Date:  2015-06-12       Impact factor: 4.379

9.  Modeling Cellular Noise Underlying Heterogeneous Cell Responses in the Epidermal Growth Factor Signaling Pathway.

Authors:  Kazunari Iwamoto; Yuki Shindo; Koichi Takahashi
Journal:  PLoS Comput Biol       Date:  2016-11-30       Impact factor: 4.475

10.  Single-molecule fluorescence imaging of RalGDS on cell surfaces during signal transduction from Ras to Ral.

Authors:  Ryo Yoshizawa; Nobuhisa Umeki; Masataka Yanagawa; Masayuki Murata; Yasushi Sako
Journal:  Biophys Physicobiol       Date:  2017-06-01
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