Literature DB >> 19714478

Spectral hole burning: examples from photosynthesis.

Robin Purchase1, Silvia Völker.   

Abstract

The optical spectra of photosynthetic pigment-protein complexes usually show broad absorption bands, often consisting of a number of overlapping, "hidden" bands belonging to different species. Spectral hole burning is an ideal technique to unravel the optical and dynamic properties of such hidden species. Here, the principles of spectral hole burning (HB) and the experimental set-up used in its continuous wave (CW) and time-resolved versions are described. Examples from photosynthesis studied with hole burning, obtained in our laboratory, are then presented. These examples have been classified into three groups according to the parameters that were measured: (1) hole widths as a function of temperature, (2) hole widths as a function of delay time and (3) hole depths as a function of wavelength. Two examples from light-harvesting (LH) 2 complexes of purple bacteria are given within the first group: (a) the determination of energy-transfer times from the chromophores in the B800 ring to the B850 ring, and (b) optical dephasing in the B850 absorption band. One example from photosystem II (PSII) sub-core complexes of higher plants is given within the second group: it shows that the size of the complex determines the amount of spectral diffusion measured. Within the third group, two examples from (green) plants and purple bacteria have been chosen for: (a) the identification of "traps" for energy transfer in PSII sub-core complexes of green plants, and (b) the uncovering of the lowest k = 0 exciton-state distribution within the B850 band of LH2 complexes of purple bacteria. The results prove the potential of spectral hole burning measurements for getting quantitative insight into dynamic processes in photosynthetic systems at low temperature, in particular, when individual bands are hidden within broad absorption bands. Because of its high-resolution wavelength selectivity, HB is a technique that is complementary to ultrafast pump-probe methods. In this review, we have provided an extensive bibliography for the benefit of scientists who plan to make use of this valuable technique in their future research.

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Year:  2009        PMID: 19714478      PMCID: PMC2744831          DOI: 10.1007/s11120-009-9484-5

Source DB:  PubMed          Journal:  Photosynth Res        ISSN: 0166-8595            Impact factor:   3.573


  53 in total

1.  Unraveling the electronic structure of individual photosynthetic pigment-protein complexes

Authors: 
Journal:  Science       Date:  1999-07-16       Impact factor: 47.728

Review 2.  Photosynthetic apparatus of purple bacteria.

Authors:  Xiche Hu; Thorsten Ritz; Ana Damjanović; Felix Autenrieth; Klaus Schulten
Journal:  Q Rev Biophys       Date:  2002-02       Impact factor: 5.318

3.  Direct observation of tiers in the energy landscape of a chromoprotein: a single-molecule study.

Authors:  Clemens Hofmann; Thijs J Aartsma; Hartmut Michel; Jürgen Köhler
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-11       Impact factor: 11.205

4.  Theory of single-molecule spectroscopy: beyond the ensemble average.

Authors:  Eli Barkai; YounJoon Jung; Robert Silbey
Journal:  Annu Rev Phys Chem       Date:  2004       Impact factor: 12.703

Review 5.  Green and red fluorescent proteins: photo- and thermally induced dynamics probed by site-selective spectroscopy and hole burning.

Authors:  S Bonsma; R Purchase; S Jezowski; J Gallus; F Könz; S Völker
Journal:  Chemphyschem       Date:  2005-05       Impact factor: 3.102

6.  The energy landscapes and motions of proteins.

Authors:  H Frauenfelder; S G Sligar; P G Wolynes
Journal:  Science       Date:  1991-12-13       Impact factor: 47.728

7.  Optical linewidths and photon-echo decays of impurities in glasses.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1987-08-15

8.  Time scales and optical dephasing measurements: Investigation of dynamics in complex systems.

Authors: 
Journal:  Phys Rev B Condens Matter       Date:  1989-05-15

9.  Atomic model of plant light-harvesting complex by electron crystallography.

Authors:  W Kühlbrandt; D N Wang; Y Fujiyoshi
Journal:  Nature       Date:  1994-02-17       Impact factor: 49.962

10.  Beyond Förster resonance energy transfer in biological and nanoscale systems.

Authors:  David Beljonne; Carles Curutchet; Gregory D Scholes; Robert J Silbey
Journal:  J Phys Chem B       Date:  2009-05-14       Impact factor: 2.991

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  10 in total

Review 1.  Selective and differential optical spectroscopies in photosynthesis.

Authors:  Elmars Krausz
Journal:  Photosynth Res       Date:  2013-07-10       Impact factor: 3.573

2.  Excitation energy transfer in phycobiliproteins of the cyanobacterium Acaryochloris marina investigated by spectral hole burning.

Authors:  Jörg Pieper; Margus Rätsep; Maksym Golub; Franz-Josef Schmitt; Petrica Artene; Hann-Jörg Eckert
Journal:  Photosynth Res       Date:  2017-05-31       Impact factor: 3.573

3.  Photothermal multispectral image cytometry for quantitative histology of nanoparticles and micrometastasis in intact, stained and selectively burned tissues.

Authors:  Dmitry A Nedosekin; Evgeny V Shashkov; Ekaterina I Galanzha; Leah Hennings; Vladimir P Zharov
Journal:  Cytometry A       Date:  2010-11       Impact factor: 4.355

4.  Single-molecule spectroscopy unmasks the lowest exciton state of the B850 assembly in LH2 from Rps. acidophila.

Authors:  Ralf Kunz; Kõu Timpmann; June Southall; Richard J Cogdell; Arvi Freiberg; Jürgen Köhler
Journal:  Biophys J       Date:  2014-05-06       Impact factor: 4.033

5.  Static Disorder in Excitation Energies of the Fenna-Matthews-Olson Protein: Structure-Based Theory Meets Experiment.

Authors:  Marten L Chaillet; Florian Lengauer; Julian Adolphs; Frank Müh; Alexander S Fokas; Daniel J Cole; Alex W Chin; Thomas Renger
Journal:  J Phys Chem Lett       Date:  2020-11-23       Impact factor: 6.475

6.  Establishment of the Qy Absorption Spectrum of Chlorophyll a Extending to Near-Infrared.

Authors:  Kristjan Leiger; Juha Matti Linnanto; Arvi Freiberg
Journal:  Molecules       Date:  2020-08-20       Impact factor: 4.411

7.  Asymmetry in the Q y Fluorescence and Absorption Spectra of Chlorophyll a Pertaining to Exciton Dynamics.

Authors:  Jeffrey R Reimers; Margus Rätsep; Arvi Freiberg
Journal:  Front Chem       Date:  2020-12-02       Impact factor: 5.221

8.  Ultrafast spectral hole burning reveals the distinct chromophores in eumelanin and their common photoresponse.

Authors:  Forrest R Kohl; Christopher Grieco; Bern Kohler
Journal:  Chem Sci       Date:  2019-12-18       Impact factor: 9.825

9.  Fluorescence-excitation and Emission Spectroscopy on Single FMO Complexes.

Authors:  Alexander Löhner; Khuram Ashraf; Richard J Cogdell; Jürgen Köhler
Journal:  Sci Rep       Date:  2016-08-22       Impact factor: 4.379

10.  Hole-Burning Spectroscopy on Excitonically Coupled Pigments in Proteins: Theory Meets Experiment.

Authors:  Julian Adolphs; Manuel Berrer; Thomas Renger
Journal:  J Am Chem Soc       Date:  2016-02-25       Impact factor: 15.419

  10 in total

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