Literature DB >> 19711934

Structural characterization of the (methanol)4 potential energy surface.

Jorge David1, Doris Guerra, Albeiro Restrepo.   

Abstract

In this paper, we report the geometries and properties of the structural isomers obtained from a random walk of the potential energy surface (PES) of the methanol tetramer. Thirty-three structures were obtained after B3LYP/6-31+g* optimization of 94 candidate structures generated from a stochastic search of the PM3 conformational space. The random search was carried out using a recently proposed modified Metropolis acceptance test in the simulated annealing (SA) procedure. Corrections for the basis set superposition error (BSSE) show improvements on the binding energies of the clusters in an average of approximately 2.0 kcal/mol, while geometries are predicted to be less sensitive to BSSE corrections. MP2/aug-cc-pvdz calculations on representative structures did not change the geometries but predicted better binding energies. Highly correlated CCSD(T) energies were calculated on the B3LYP and MP2 stationary points and used to establish relative stabilities. We report several new conformations and group the structures into six distinct geometrical motifs. Only the cyclic tetramers with four primary hydrogen bonds in the same plane are predicted to have significant populations. Secondary hydrogen bonds, those for which the donated proton comes from an alkyl group, lead to a rich conformational space.

Entities:  

Mesh:

Substances:

Year:  2009        PMID: 19711934     DOI: 10.1021/jp9041099

Source DB:  PubMed          Journal:  J Phys Chem A        ISSN: 1089-5639            Impact factor:   2.781


  6 in total

1.  Structures, energies and bonding in neutral and charged Li microclusters.

Authors:  Diana Yepes; Steven Robert Kirk; Samantha Jenkins; Albeiro Restrepo
Journal:  J Mol Model       Date:  2012-04-27       Impact factor: 1.810

Review 2.  A global optimization perspective on molecular clusters.

Authors:  J M C Marques; F B Pereira; J L Llanio-Trujillo; P E Abreu; M Albertí; A Aguilar; F Pirani; M Bartolomei
Journal:  Philos Trans A Math Phys Eng Sci       Date:  2017-04-28       Impact factor: 4.226

3.  Structural characterization of the (MeSH)4 potential energy surface.

Authors:  Sara Gómez; Doris Guerra; Jorge David; Albeiro Restrepo
Journal:  J Mol Model       Date:  2013-02-12       Impact factor: 1.810

4.  Microsolvation of Mg²⁺, Ca²⁺: strong influence of formal charges in hydrogen bond networks.

Authors:  Juan David Gonzalez; Elizabeth Florez; Jonathan Romero; Andrés Reyes; Albeiro Restrepo
Journal:  J Mol Model       Date:  2013-01-10       Impact factor: 1.810

5.  A molecular twist on hydrophobicity.

Authors:  Sara Gómez; Natalia Rojas-Valencia; Santiago A Gómez; Chiara Cappelli; Gabriel Merino; Albeiro Restrepo
Journal:  Chem Sci       Date:  2021-06-15       Impact factor: 9.825

6.  Structural Assessment of Hydrogen Bonds on Methylpentynol-Azide Clusters To Achieve Regiochemical Outcome of 1,3-Dipolar Cycloaddition Reactions Using Density Functional Theory.

Authors:  Marzieh Hashemi; Avat Arman Taherpour
Journal:  ACS Omega       Date:  2020-03-10
  6 in total

北京卡尤迪生物科技股份有限公司 © 2022-2023.