Literature DB >> 1970434

Catalytic mechanism of fungal glucoamylase as defined by mutagenesis of Asp176, Glu179 and Glu180 in the enzyme from Aspergillus awamori.

M R Sierks1, C Ford, P J Reilly, B Svensson.   

Abstract

Asp176, Glu179 and Glu180 of Aspergillus awamori glucoamylase appeared by differential labeling to be in the active site. To test their functions, they were replaced by mutagenesis with Asn, Gln and Gln respectively, and kinetic parameters and pH dependencies of all enzyme forms were determined. Glu179----Gln glucoamylase was not active on maltose or isomaltose, while the kcat for maltoheptaose hydrolysis decreased almost 2000-fold and the KM was essentially unchanged from wild-type glucoamylase. The The Glu180----Gln mutation drastically increased the KM and moderately decreased the kcat with maltose and maltoheptaose, but affected isomaltose hydrolysis less. Difference in substrate activation energies between Glu180----Gln and wild-type glucoamylases indicate that Glu180 binds D-glucosyl residues in subsite 2. The Asp176----Asn substitution gave moderate increases and decreases in KM and kcat respectively, and therefore similar increases in activation energies for the three substrates. This and the differences in subsite binding energies between Asp176----Asn and wild-type glucoamylases suggest that Asp176 is near subsite 1, where it stabilizes the transition state and interacts with Trp120 at subsite 4. Glu179 and Asp176 are thus proposed as the general catalytic acid and base of pKa 5.9 and 2.7 respectively. The charged Glu180 contributes to the high pKa value of Glu179.

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Year:  1990        PMID: 1970434     DOI: 10.1093/protein/3.3.193

Source DB:  PubMed          Journal:  Protein Eng        ISSN: 0269-2139


  10 in total

1.  pH-dependence of the fast step of maltose hydrolysis catalysed by glucoamylase G1 from Aspergillus niger.

Authors:  U Christensen
Journal:  Biochem J       Date:  2000-07-15       Impact factor: 3.857

2.  Molecular cloning and transcriptional analysis of the Aspergillus terreus gla1 gene encoding a glucoamylase.

Authors:  L Ventura; L González-Candelas; J A Pérez-González; D Ramón
Journal:  Appl Environ Microbiol       Date:  1995-01       Impact factor: 4.792

3.  Identification of GH15 Family Thermophilic Archaeal Trehalases That Function within a Narrow Acidic-pH Range.

Authors:  Masayoshi Sakaguchi; Satoru Shimodaira; Shin-Nosuke Ishida; Miko Amemiya; Shotaro Honda; Yasusato Sugahara; Fumitaka Oyama; Masao Kawakita
Journal:  Appl Environ Microbiol       Date:  2015-05-15       Impact factor: 4.792

4.  Structure-function analysis of silkworm sucrose hydrolase uncovers the mechanism of substrate specificity in GH13 subfamily 17 exo-α-glucosidases.

Authors:  Takatsugu Miyazaki; Enoch Y Park
Journal:  J Biol Chem       Date:  2020-05-07       Impact factor: 5.157

5.  Production, purification and characterization of the catalytic domain of glucoamylase from Aspergillus niger.

Authors:  B Stoffer; T P Frandsen; P K Busk; P Schneider; I Svendsen; B Svensson
Journal:  Biochem J       Date:  1993-05-15       Impact factor: 3.857

6.  Identification of two acidic residues involved in the catalysis of xylanase A from Streptomyces lividans.

Authors:  A Moreau; M Roberge; C Manin; F Shareck; D Kluepfel; R Morosoli
Journal:  Biochem J       Date:  1994-08-15       Impact factor: 3.857

7.  Protein engineering of the 2-haloacid halidohydrolase IVa from Pseudomonas cepacia MBA4.

Authors:  W Asmara; U Murdiyatmo; A J Baines; A T Bull; D J Hardman
Journal:  Biochem J       Date:  1993-05-15       Impact factor: 3.857

8.  Stereochemical course and structure of the products of the enzymic action of endo-1,3-1,4-beta-D-glucan 4-glucanohydrolase from Bacillus licheniformis.

Authors:  C Malet; J Jiménez-Barbero; M Bernabé; C Brosa; A Planas
Journal:  Biochem J       Date:  1993-12-15       Impact factor: 3.857

9.  Improving Thermostability of Chimeric Enzymes Generated by Domain Shuffling Between Two Different Original Glucoamylases.

Authors:  Zhongxiu Chen; Longbin Wang; Yuyu Shen; Dunji Hu; Liying Zhou; Fuping Lu; Ming Li
Journal:  Front Bioeng Biotechnol       Date:  2022-04-05

10.  Glucoamylase of Caulobacter crescentus CB15: cloning and expression in Escherichia coli and functional identification.

Authors:  Masayoshi Sakaguchi; Yudai Matsushima; Toshiyuki Nankumo; Junichi Seino; Satoshi Miyakawa; Shotaro Honda; Yasusato Sugahara; Fumitaka Oyama; Masao Kawakita
Journal:  AMB Express       Date:  2014-01-27       Impact factor: 3.298

  10 in total

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