Literature DB >> 19703589

Trim43a, Trim43b, and Trim43c: Novel mouse genes expressed specifically in mouse preimplantation embryos.

Ilaria Stanghellini1, Geppino Falco, Sung-Lim Lee, Manuela Monti, Minoru S H Ko.   

Abstract

We describe the identification and characterization of Trim43a, Trim43b, and Trim43c genes, whose expression are restricted to preimplantation stages and peak at the 8-cell to morula stage. We identified a 5kb DNA fragment that covers upstream region of Trim43a as a putative promoter, which can drive the expression of mStrawberry fluorescent protein in a manner similar to endogenous Trim43 genes. Trim43 genes will be useful stage-specific markers for the study of preimplantation embryos.

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Year:  2009        PMID： 19703589      PMCID： PMC2784184          DOI： 10.1016/j.gep.2009.08.002

Source DB:  PubMed          Journal:  Gene Expr Patterns        ISSN： 1567-133X            Impact factor:   1.224


  19 in total

1.  Dynamics of global gene expression changes during mouse preimplantation development.

Authors:  Toshio Hamatani; Mark G Carter; Alexei A Sharov; Minoru S H Ko
Journal:  Dev Cell       Date:  2004-01       Impact factor: 12.270

2.  Transcript profiling during preimplantation mouse development.

Authors:  Fanyi Zeng; Don A Baldwin; Richard M Schultz
Journal:  Dev Biol       Date:  2004-08-15       Impact factor: 3.582

3.  Basic local alignment search tool.

Authors:  S F Altschul; W Gish; W Miller; E W Myers; D J Lipman
Journal:  J Mol Biol       Date:  1990-10-05       Impact factor: 5.469

Review 4.  A guide to choosing fluorescent proteins.

Authors:  Nathan C Shaner; Paul A Steinbach; Roger Y Tsien
Journal:  Nat Methods       Date:  2005-12       Impact factor: 28.547

5.  Gene expression in the preimplantation embryo: in-vitro developmental changes.

Authors:  Shunping Wang; Chad A Cowan; Hiram Chipperfield; R Douglas Powers
Journal:  Reprod Biomed Online       Date:  2005-05       Impact factor: 3.828

6.  Variegated expression from the murine band 3 (AE1) promoter in transgenic mice is associated with mRNA transcript initiation at upstream start sites and can be suppressed by the addition of the chicken beta-globin 5' HS4 insulator element.

Authors:  Tiffany F Frazar; Jessica L Weisbein; Stacie M Anderson; Amanda P Cline; Lisa J Garrett; Gary Felsenfeld; Patrick G Gallagher; David M Bodine
Journal:  Mol Cell Biol       Date:  2003-07       Impact factor: 4.272

7.  General method for the modification of different BAC types and the rapid generation of BAC transgenic mice.

Authors:  Tim Sparwasser; Shiaoching Gong; James Y H Li; Gerard Eberl
Journal:  Genesis       Date:  2004-01       Impact factor: 2.487

Review 8.  TRIM/RBCC, a novel class of 'single protein RING finger' E3 ubiquitin ligases.

Authors:  Germana Meroni; Graciana Diez-Roux
Journal:  Bioessays       Date:  2005-11       Impact factor: 4.345

9.  A genome-wide study of gene activity reveals developmental signaling pathways in the preimplantation mouse embryo.

Authors:  Q Tian Wang; Karolina Piotrowska; Maria Anna Ciemerych; Ljiljana Milenkovic; Matthew P Scott; Ronald W Davis; Magdalena Zernicka-Goetz
Journal:  Dev Cell       Date:  2004-01       Impact factor: 12.270

10.  Transcriptome analysis of mouse stem cells and early embryos.

Authors:  Alexei A Sharov; Yulan Piao; Ryo Matoba; Dawood B Dudekula; Yong Qian; Vincent VanBuren; Geppino Falco; Patrick R Martin; Carole A Stagg; Uwem C Bassey; Yuxia Wang; Mark G Carter; Toshio Hamatani; Kazuhiro Aiba; Hidenori Akutsu; Lioudmila Sharova; Tetsuya S Tanaka; Wendy L Kimber; Toshiyuki Yoshikawa; Saied A Jaradat; Serafino Pantano; Ramaiah Nagaraja; Kenneth R Boheler; Dennis Taub; Richard J Hodes; Dan L Longo; David Schlessinger; Jonathan Keller; Emily Klotz; Garnett Kelsoe; Akihiro Umezawa; Angelo L Vescovi; Janet Rossant; Tilo Kunath; Brigid L M Hogan; Anna Curci; Michele D'Urso; Janet Kelso; Winston Hide; Minoru S H Ko
Journal:  PLoS Biol       Date:  2003-12-22       Impact factor: 8.029
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  6 in total

1.  Generation of isogenic D4Z4 contracted and noncontracted immortal muscle cell clones from a mosaic patient: a cellular model for FSHD.

Authors:  Yvonne D Krom; Julie Dumonceaux; Kamel Mamchaoui; Bianca den Hamer; Virginie Mariot; Elisa Negroni; Linda N Geng; Nicolas Martin; Rabi Tawil; Stephen J Tapscott; Baziel G M van Engelen; Vincent Mouly; Gillian S Butler-Browne; Silvère M van der Maarel
Journal:  Am J Pathol       Date:  2012-08-04       Impact factor: 4.307

2.  DUX4 activates germline genes, retroelements, and immune mediators: implications for facioscapulohumeral dystrophy.

Authors:  Linda N Geng; Zizhen Yao; Lauren Snider; Abraham P Fong; Jennifer N Cech; Janet M Young; Silvere M van der Maarel; Walter L Ruzzo; Robert C Gentleman; Rabi Tawil; Stephen J Tapscott
Journal:  Dev Cell       Date:  2011-12-29       Impact factor: 12.270

3.  Centrosomal protein TRIM43 restricts herpesvirus infection by regulating nuclear lamina integrity.

Authors:  Florian Full; Michiel van Gent; Konstantin M J Sparrer; Cindy Chiang; Matthew A Zurenski; Myriam Scherer; Norbert H Brockmeyer; Lucie Heinzerling; Michael Stürzl; Klaus Korn; Thomas Stamminger; Armin Ensser; Michaela U Gack
Journal:  Nat Microbiol       Date:  2018-11-12       Impact factor: 17.745

4.  Zscan4 transiently reactivates early embryonic genes during the generation of induced pluripotent stem cells.

Authors:  Tetsuya Hirata; Tomokazu Amano; Yuhki Nakatake; Misa Amano; Yulan Piao; Hien G Hoang; Minoru S H Ko
Journal:  Sci Rep       Date:  2012-01-04       Impact factor: 4.379

5.  Direct interplay between two candidate genes in FSHD muscular dystrophy.

Authors:  Giulia Ferri; Claudia H Huichalaf; Roberta Caccia; Davide Gabellini
Journal:  Hum Mol Genet       Date:  2014-10-17       Impact factor: 6.150

6.  Oocyte-like cells induced from mouse spermatogonial stem cells.

Authors:  Lu Wang; Jinping Cao; Ping Ji; Di Zhang; Lianghong Ma; Martin Dym; Zhuo Yu; Lixin Feng
Journal:  Cell Biosci       Date:  2012-08-06       Impact factor: 7.133
  6 in total

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