Literature DB >> 19702309

Beyond thermodynamics: drug binding kinetics could influence epidermal growth factor signaling.

Mayank Goyal1, Michael Rizzo, Frank Schumacher, Chung F Wong.   

Abstract

We modeled the kinetics of drug binding to protein kinases in the EGF signaling pathway relevant to non-small-cell lung cancer and found that binding kinetics could influence therapeutic potential, that fast binding kinetics was advantageous for most targets with a couple of exceptions, that targeting some protein kinases could enhance rather than attenuate the pathway, and that IC(50) could be sensitive to the kinetic parameters of drug binding.

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Year:  2009        PMID: 19702309      PMCID: PMC2746254          DOI: 10.1021/jm900974p

Source DB:  PubMed          Journal:  J Med Chem        ISSN: 0022-2623            Impact factor:   7.446


  11 in total

1.  Disabling erbB receptors with rationally designed exocyclic mimetics of antibodies: structure-function analysis.

Authors:  A Berezov; H T Zhang; M I Greene; R Murali
Journal:  J Med Chem       Date:  2001-08-02       Impact factor: 7.446

Review 2.  The dynamics of T cell receptor signaling: complex orchestration and the key roles of tempo and cooperation.

Authors:  R N Germain; I Stefanová
Journal:  Annu Rev Immunol       Date:  1999       Impact factor: 28.527

3.  Ultra-potent antibodies against respiratory syncytial virus: effects of binding kinetics and binding valence on viral neutralization.

Authors:  Herren Wu; David S Pfarr; Ying Tang; Ling-Ling An; Nita K Patel; Jeffry D Watkins; William D Huse; Peter A Kiener; James F Young
Journal:  J Mol Biol       Date:  2005-07-01       Impact factor: 5.469

4.  COPASI--a COmplex PAthway SImulator.

Authors:  Stefan Hoops; Sven Sahle; Ralph Gauges; Christine Lee; Jürgen Pahle; Natalia Simus; Mudita Singhal; Liang Xu; Pedro Mendes; Ursula Kummer
Journal:  Bioinformatics       Date:  2006-10-10       Impact factor: 6.937

Review 5.  Residence time of receptor-ligand complexes and its effect on biological function.

Authors:  Peter J Tummino; Robert A Copeland
Journal:  Biochemistry       Date:  2008-04-16       Impact factor: 3.162

6.  A TCR binds to antagonist ligands with lower affinities and faster dissociation rates than to agonists.

Authors:  D S Lyons; S A Lieberman; J Hampl; J J Boniface; Y Chien; L J Berg; M M Davis
Journal:  Immunity       Date:  1996-07       Impact factor: 31.745

Review 7.  Ligand recognition by alpha beta T cell receptors.

Authors:  M M Davis; J J Boniface; Z Reich; D Lyons; J Hampl; B Arden; Y Chien
Journal:  Annu Rev Immunol       Date:  1998       Impact factor: 28.527

8.  Kinetics of T-cell receptor binding to peptide/I-Ek complexes: correlation of the dissociation rate with T-cell responsiveness.

Authors:  K Matsui; J J Boniface; P Steffner; P A Reay; M M Davis
Journal:  Proc Natl Acad Sci U S A       Date:  1994-12-20       Impact factor: 11.205

Review 9.  Molecular interactions mediating T cell antigen recognition.

Authors:  P Anton van der Merwe; Simon J Davis
Journal:  Annu Rev Immunol       Date:  2001-12-19       Impact factor: 28.527

10.  Simulating non-small cell lung cancer with a multiscale agent-based model.

Authors:  Zhihui Wang; Le Zhang; Jonathan Sagotsky; Thomas S Deisboeck
Journal:  Theor Biol Med Model       Date:  2007-12-21       Impact factor: 2.432

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  1 in total

1.  Improved Antiviral Activity of a Polyamide Against High-Risk Human Papillomavirus Via N-Terminal Guanidinium Substitution.

Authors:  C H Castaneda; M J Scuderi; T G Edwards; G D Harris; C M Dupureur; K J Koeller; C Fisher; J K Bashkin
Journal:  Medchemcomm       Date:  2016-10-05       Impact factor: 3.597

  1 in total

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