Literature DB >> 19692408

Prelife catalysts and replicators.

Hisashi Ohtsuki1, Martin A Nowak.   

Abstract

Life is based on replication and evolution. But replication cannot be taken for granted. We must ask what there was prior to replication and evolution. How does evolution begin? We have proposed prelife as a generative system that produces information and diversity in the absence of replication. We model prelife as a binary soup of active monomers that form random polymers. 'Prevolutionary' dynamics can have mutation and selection prior to replication. Some sequences might have catalytic activity, thereby enhancing the rates of certain prelife reactions. We study the selection criteria for these prelife catalysts. Their catalytic efficiency must be above certain critical values. We find a maintenance threshold and an initiation threshold. The former is a linear function of sequence length, and the latter is an exponential function of sequence length. Therefore, it is extremely hard to select for prelife catalysts that have long sequences. We compare prelife catalysis with a simple model for replication. Assuming fast template-based elongation reactions, we can show that replicators have selection thresholds that are independent of their sequence length. Our calculation demonstrates the efficiency of replication and provides an explanation of why replication was selected over other forms of prelife catalysis.

Mesh:

Year:  2009        PMID: 19692408      PMCID: PMC2817291          DOI: 10.1098/rspb.2009.1136

Source DB:  PubMed          Journal:  Proc Biol Sci        ISSN: 0962-8452            Impact factor:   5.349


  56 in total

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Authors:  W K Johnston; P J Unrau; M S Lawrence; M E Glasner; D P Bartel
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3.  A production of amino acids under possible primitive earth conditions.

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Journal:  Science       Date:  1953-05-15       Impact factor: 47.728

4.  Membrane growth can generate a transmembrane pH gradient in fatty acid vesicles.

Authors:  Irene A Chen; Jack W Szostak
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5.  A simpler origin for life.

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Journal:  Sci Am       Date:  2007-06       Impact factor: 2.142

6.  Evolution of the genetic apparatus.

Authors:  L E Orgel
Journal:  J Mol Biol       Date:  1968-12       Impact factor: 5.469

7.  A model for the origin of life.

Authors:  F J Dyson
Journal:  J Mol Evol       Date:  1982       Impact factor: 2.395

8.  A kinetic study of the growth of fatty acid vesicles.

Authors:  Irene A Chen; Jack W Szostak
Journal:  Biophys J       Date:  2004-08       Impact factor: 4.033

9.  Synthesis of phosphatidylcholine under possible primitive earth conditions.

Authors:  M Rao; M R Eichberg; J Oró
Journal:  J Mol Evol       Date:  1982       Impact factor: 2.395

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Authors:  Irene A Chen; Richard W Roberts; Jack W Szostak
Journal:  Science       Date:  2004-09-03       Impact factor: 47.728

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  9 in total

Review 1.  The RNA World: molecular cooperation at the origins of life.

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Journal:  Nat Rev Genet       Date:  2014-11-11       Impact factor: 53.242

2.  Foldamer hypothesis for the growth and sequence differentiation of prebiotic polymers.

Authors:  Elizaveta Guseva; Ronald N Zuckermann; Ken A Dill
Journal:  Proc Natl Acad Sci U S A       Date:  2017-08-22       Impact factor: 11.205

3.  From prelife to life: how chemical kinetics become evolutionary dynamics.

Authors:  Irene A Chen; Martin A Nowak
Journal:  Acc Chem Res       Date:  2012-02-15       Impact factor: 22.384

4.  The basic reproductive ratio of life.

Authors:  Michael L Manapat; Irene A Chen; Martin A Nowak
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5.  Computability, Gödel's incompleteness theorem, and an inherent limit on the predictability of evolution.

Authors:  Troy Day
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6.  The origin of large molecules in primordial autocatalytic reaction networks.

Authors:  Varun Giri; Sanjay Jain
Journal:  PLoS One       Date:  2012-01-04       Impact factor: 3.240

7.  Co-operation between Polymerases and Nucleotide Synthetases in the RNA World.

Authors:  Ye Eun Kim; Paul G Higgs
Journal:  PLoS Comput Biol       Date:  2016-11-07       Impact factor: 4.475

8.  The origin of life is a spatially localized stochastic transition.

Authors:  Meng Wu; Paul G Higgs
Journal:  Biol Direct       Date:  2012-11-24       Impact factor: 4.540

9.  Prebiotic selection for motifs in a model of template-free elongation of polymers within compartments.

Authors:  Grant Kinsler; Sam Sinai; Nicholas Keone Lee; Martin A Nowak
Journal:  PLoS One       Date:  2017-07-19       Impact factor: 3.240

  9 in total

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