Literature DB >> 19691504

Abundance of Zetaproteobacteria within crustal fluids in back-arc hydrothermal fields of the Southern Mariana Trough.

Shingo Kato1, Katsunori Yanagawa, Michinari Sunamura, Yoshinori Takano, Jun-ichiro Ishibashi, Takeshi Kakegawa, Motoo Utsumi, Toshiro Yamanaka, Tomohiro Toki, Takuroh Noguchi, Kensei Kobayashi, Arimichi Moroi, Hiroyuki Kimura, Yutaka Kawarabayasi, Katsumi Marumo, Tetsuro Urabe, Akihiko Yamagishi.   

Abstract

To extend knowledge of subseafloor microbial communities within the oceanic crust, the abundance, diversity and composition of microbial communities in crustal fluids at back-arc hydrothermal fields of the Southern Mariana Trough (SMT) were investigated using culture-independent molecular techniques based on 16S rRNA gene sequences. Seafloor drilling was carried out at two hydrothermal fields, on- and off-ridge of the back-arc spreading centre of the SMT. 16S rRNA gene clone libraries for bacterial and archaeal communities were constructed from the fluid samples collected from the boreholes. Phylotypes related to Thiomicrospira in the Gammaproteobacteria (putative sulfide-oxidizers) and Mariprofundus in the Zetaproteobacteria (putative iron-oxidizers) were recovered from the fluid samples. A number of unique archaeal phylotypes were also recovered. Fluorescence in situ hybridization (FISH) analysis indicated the presence of active bacterial and archaeal populations in the fluids. The Zetaproteobacteria accounted for up to 32% of the total prokaryotic cell number as shown by FISH analysis using a specific probe designed in this study. Our results lead to the hypothesis that the Zetaproteobacteria play a role in iron oxidation within the oceanic crust.

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Year:  2009        PMID: 19691504     DOI: 10.1111/j.1462-2920.2009.02031.x

Source DB:  PubMed          Journal:  Environ Microbiol        ISSN: 1462-2912            Impact factor:   5.491


  36 in total

1.  Distribution and phylogenetic diversity of cbbM genes encoding RubisCO form II in a deep-sea hydrothermal field revealed by newly designed PCR primers.

Authors:  Shingo Kato; Michiyuki Nakawake; Moriya Ohkuma; Akihiko Yamagishi
Journal:  Extremophiles       Date:  2012-01-03       Impact factor: 2.395

2.  Diverse styles of submarine venting on the ultraslow spreading Mid-Cayman Rise.

Authors:  C R German; A Bowen; M L Coleman; D L Honig; J A Huber; M V Jakuba; J C Kinsey; M D Kurz; S Leroy; J M McDermott; B Mercier de Lépinay; K Nakamura; J S Seewald; J L Smith; S P Sylva; C L Van Dover; L L Whitcomb; D R Yoerger
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-21       Impact factor: 11.205

3.  Microaerophilic Fe(II)-Oxidizing Zetaproteobacteria Isolated from Low-Fe Marine Coastal Sediments: Physiology and Composition of Their Twisted Stalks.

Authors:  K Laufer; M Nordhoff; M Halama; R E Martinez; M Obst; M Nowak; H Stryhanyuk; H H Richnow; A Kappler
Journal:  Appl Environ Microbiol       Date:  2017-03-31       Impact factor: 4.792

4.  Biogeography and biodiversity in sulfide structures of active and inactive vents at deep-sea hydrothermal fields of the Southern Mariana Trough.

Authors:  Shingo Kato; Yoshinori Takano; Takeshi Kakegawa; Hironori Oba; Kazuhiko Inoue; Chiyori Kobayashi; Motoo Utsumi; Katsumi Marumo; Kensei Kobayashi; Yuki Ito; Jun-ichiro Ishibashi; Akihiko Yamagishi
Journal:  Appl Environ Microbiol       Date:  2010-03-12       Impact factor: 4.792

5.  Community shift from phototrophic to chemotrophic sulfide oxidation following anoxic holomixis in a stratified seawater lake.

Authors:  Petra Pjevac; Marino Korlević; Jasmine S Berg; Elvira Bura-Nakić; Irena Ciglenečki; Rudolf Amann; Sandi Orlić
Journal:  Appl Environ Microbiol       Date:  2014-10-24       Impact factor: 4.792

6.  Defining boundaries for the distribution of microbial communities beneath the sediment-buried, hydrothermally active seafloor.

Authors:  Katsunori Yanagawa; Akira Ijiri; Anja Breuker; Sanae Sakai; Youko Miyoshi; Shinsuke Kawagucci; Takuroh Noguchi; Miho Hirai; Axel Schippers; Jun-Ichiro Ishibashi; Yoshihiro Takaki; Michinari Sunamura; Tetsuro Urabe; Takuro Nunoura; Ken Takai
Journal:  ISME J       Date:  2016-10-18       Impact factor: 10.302

7.  Biodiversity and emerging biogeography of the neutrophilic iron-oxidizing Zetaproteobacteria.

Authors:  Sean M McAllister; Richard E Davis; Joyce M McBeth; Bradley M Tebo; David Emerson; Craig L Moyer
Journal:  Appl Environ Microbiol       Date:  2011-06-10       Impact factor: 4.792

Review 8.  Iron-oxidizing bacteria in marine environments: recent progresses and future directions.

Authors:  Hiroko Makita
Journal:  World J Microbiol Biotechnol       Date:  2018-07-04       Impact factor: 3.312

9.  Comparative Analysis of Microbial Communities in Iron-Dominated Flocculent Mats in Deep-Sea Hydrothermal Environments.

Authors:  Hiroko Makita; Sakiko Kikuchi; Satoshi Mitsunobu; Yoshihiro Takaki; Toshiro Yamanaka; Tomohiro Toki; Takuroh Noguchi; Kentaro Nakamura; Mariko Abe; Miho Hirai; Masahiro Yamamoto; Katsuyuki Uematsu; Junichi Miyazaki; Takuro Nunoura; Yoshio Takahashi; Ken Takai
Journal:  Appl Environ Microbiol       Date:  2016-09-16       Impact factor: 4.792

10.  Aerobic and anaerobic iron oxidizers together drive denitrification and carbon cycling at marine iron-rich hydrothermal vents.

Authors:  Sean M McAllister; Rebecca Vandzura; Jessica L Keffer; Shawn W Polson; Clara S Chan
Journal:  ISME J       Date:  2020-12-17       Impact factor: 10.302

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