Literature DB >> 19685270

Comparative cytogenetics of cichlid fishes through genomic in-situ hybridization (GISH) with emphasis on Oreochromis niloticus.

Guilherme Targino Valente1, Carlos Henrique Schneider, Maria Claudia Gross, Eliana Feldberg, Cesar Martins.   

Abstract

Cichlidae is the most species-rich freshwater family of Perciformes and has attracted the attention of aquarium hobbyists, aquaculturists, and sport fisherman. Oreochromis niloticus is very important in aquaculture today and is currently used in varied areas of study as an 'experimental model'. Oreochromis niloticus has been characterized using classical and molecular cytogenetic techniques, with special attention paid to heterochromatin structure and the identification of sex chromosomes. In this study, we compare the genome of O. niloticus with that of other cichlids from Africa and South America using genomic in-situ hybridization (GISH). Our results show that at least some elements comprising the pericentromeric heterochromatin of Nile tilapia are species-specific and that the sequence of the majority of the long arm of the largest chromosome pair is conserved within the tilapiine group, which is composed of the genera Tilapia, Oreochromis, and Sarotherodon. It is suggested that the extensive regions of repeated DNA in the largest chromosome pair of O. niloticus resulted from chromosome rearrangement or accumulation caused by recombination suppression during the evolutionary history of the tilapiines.

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Year:  2009        PMID: 19685270     DOI: 10.1007/s10577-009-9067-5

Source DB:  PubMed          Journal:  Chromosome Res        ISSN: 0967-3849            Impact factor:   5.239


  29 in total

1.  Early origins of the X and Y chromosomes: lessons from tilapia.

Authors:  D K Griffin; S C Harvey; R Campos-Ramos; L-J Ayling; N R Bromage; J S Masabanda; D J Penman
Journal:  Cytogenet Genome Res       Date:  2002       Impact factor: 1.636

2.  Origin of the superflock of cichlid fishes from Lake Victoria, East Africa.

Authors:  Erik Verheyen; Walter Salzburger; Jos Snoeks; Axel Meyer
Journal:  Science       Date:  2003-03-20       Impact factor: 47.728

3.  Molecular phylogeny and evidence for an adaptive radiation of geophagine cichlids from South America (Perciformes: Labroidei).

Authors:  Hernán López-Fernández; Rodney L Honeycutt; Kirk O Winemiller
Journal:  Mol Phylogenet Evol       Date:  2005-01       Impact factor: 4.286

Review 4.  Reinterpreting pericentromeric heterochromatin.

Authors:  Christopher N Topp; R Kelly Dawe
Journal:  Curr Opin Plant Biol       Date:  2006-10-02       Impact factor: 7.834

5.  Exclusion of Wilms tumour (WT1b) and ovarian cytochrome P450 aromatase (CYP19A1) as candidates for sex determination genes in Nile tilapia (Oreochromis niloticus).

Authors:  B Y Lee; T D Kocher
Journal:  Anim Genet       Date:  2007-02       Impact factor: 3.169

Review 6.  Something from nothing: the evolution and utility of satellite repeats.

Authors:  A K Csink; S Henikoff
Journal:  Trends Genet       Date:  1998-05       Impact factor: 11.639

7.  BIOCHEMICAL AND CYTOLOGICAL DIFFERENTIATION AMONG CICHLID FISHES OF THE SEA OF GALILEE.

Authors:  I L Kornfield; U Ritte; C Richler; J Wahrman
Journal:  Evolution       Date:  1979-03       Impact factor: 3.694

8.  Karyotype evolution in Tilapia: mitotic and meiotic chromosome analysis of Oreochromis karongae and O. niloticus x O. karongae hybrids.

Authors:  S C Harvey; R Campos-Ramos; D D Kennedy; M T Ezaz; N R Bromage; D K Griffin; D J Penman
Journal:  Genetica       Date:  2002-06       Impact factor: 1.082

9.  [Studies on the sexual behavior in the species Tilapia (Chichlidae, Teleostei) and in hybrid types].

Authors:  W Heinrich
Journal:  Z Tierpsychol       Date:  1967-12

10.  The medaka draft genome and insights into vertebrate genome evolution.

Authors:  Masahiro Kasahara; Kiyoshi Naruse; Shin Sasaki; Yoichiro Nakatani; Wei Qu; Budrul Ahsan; Tomoyuki Yamada; Yukinobu Nagayasu; Koichiro Doi; Yasuhiro Kasai; Tomoko Jindo; Daisuke Kobayashi; Atsuko Shimada; Atsushi Toyoda; Yoko Kuroki; Asao Fujiyama; Takashi Sasaki; Atsushi Shimizu; Shuichi Asakawa; Nobuyoshi Shimizu; Shin-Ichi Hashimoto; Jun Yang; Yongjun Lee; Kouji Matsushima; Sumio Sugano; Mitsuru Sakaizumi; Takanori Narita; Kazuko Ohishi; Shinobu Haga; Fumiko Ohta; Hisayo Nomoto; Keiko Nogata; Tomomi Morishita; Tomoko Endo; Tadasu Shin-I; Hiroyuki Takeda; Shinichi Morishita; Yuji Kohara
Journal:  Nature       Date:  2007-06-07       Impact factor: 49.962

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  12 in total

1.  FISH and GISH: molecular cytogenetic tools and their applications in ornamental plants.

Authors:  Adnan Younis; Fahad Ramzan; Yoon-Jung Hwang; Ki-Byung Lim
Journal:  Plant Cell Rep       Date:  2015-06-30       Impact factor: 4.570

2.  Chromosome evolution in African cichlid fish: contributions from the physical mapping of repeated DNAs.

Authors:  I A Ferreira; A B Poletto; T D Kocher; J C Mota-Velasco; D J Penman; C Martins
Journal:  Cytogenet Genome Res       Date:  2010-07-06       Impact factor: 1.636

3.  Genomic characterization of interspecific hybrids between the scallops Argopecten purpuratus and A. irradians irradians.

Authors:  Liping Hu; Xiaoting Huang; Junxia Mao; Chunde Wang; Zhenmin Bao
Journal:  PLoS One       Date:  2013-04-19       Impact factor: 3.240

4.  Fertilization and cytogenetic examination of interspecific reciprocal hybridization between the scallops, Chlamys farreri and Mimachlamys nobilis.

Authors:  Xiaoting Huang; Ke Bi; Liping Hu; Yan Sun; Wei Lu; Zhenmin Bao
Journal:  PLoS One       Date:  2011-11-14       Impact factor: 3.240

5.  Genomic in situ hybridization identifies parental chromosomes in hybrid scallop (Bivalvia, Pectinoida, Pectinidae) between female Chlamysfarreri and male Argopectenirradiansirradians.

Authors:  Xiaoting Huang; Ke Bi; Wei Lu; Shi Wang; Lingling Zhang; Zhenmin Bao
Journal:  Comp Cytogenet       Date:  2015-05-20       Impact factor: 1.800

6.  Comparative cytogenetics of Neotropical cichlid fishes (Nannacara, Ivanacara and Cleithracara) indicates evolutionary reduction of diploid chromosome numbers.

Authors:  Lucie Hodaňová; Lukáš Kalous; Zuzana Musilová
Journal:  Comp Cytogenet       Date:  2014-08-08       Impact factor: 1.800

7.  Sex Chromosome Evolution and Genomic Divergence in the Fish Hoplias malabaricus (Characiformes, Erythrinidae).

Authors:  Alexandr Sember; Luiz A C Bertollo; Petr Ráb; Cassia F Yano; Terumi Hatanaka; Ezequiel A de Oliveira; Marcelo de Bello Cioffi
Journal:  Front Genet       Date:  2018-03-05       Impact factor: 4.599

8.  Integrating cytogenetics and genomics in comparative evolutionary studies of cichlid fish.

Authors:  Juliana Mazzuchelli; Thomas David Kocher; Fengtang Yang; Cesar Martins
Journal:  BMC Genomics       Date:  2012-09-09       Impact factor: 3.969

9.  Identifying parental chromosomes and genomic rearrangements in animal hybrid complexes of species with small genome size using Genomic In Situ Hybridization (GISH).

Authors:  Massimiliano Rampin; Ke Bi; James P Bogart; Maria João Collares-Pereira
Journal:  Comp Cytogenet       Date:  2012-09-14       Impact factor: 1.800

10.  Asexual Reproduction Does Not Apparently Increase the Rate of Chromosomal Evolution: Karyotype Stability in Diploid and Triploid Clonal Hybrid Fish (Cobitis, Cypriniformes, Teleostei).

Authors:  Zuzana Majtánová; Lukáš Choleva; Radka Symonová; Petr Ráb; Jan Kotusz; Ladislav Pekárik; Karel Janko
Journal:  PLoS One       Date:  2016-01-25       Impact factor: 3.240

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