Literature DB >> 19682998

Conformational flexibility in immunoglobulin E-Fc 3-4 revealed in multiple crystal forms.

Beth A Wurzburg1, Theodore S Jardetzky.   

Abstract

The structure of immunoglobulin E (<pan class="Chemical">span class="Gene">IgEn>n>)-Fc(3-4) has been solved in three new crystal forms, providing 13 snapshots of the Fc conformation and revealing a diverse range of open-closed motions among subunit chains and dimers. A more detailed analysis of the open-to-closed motion of <sppan>an class="Gene">IgE-Fc(3-4) was possible with so many structures, and the new structures allow a more thorough examination of the flexibility of IgE-Fc and its implications for receptor binding. The existence of a hydrophobic pocket at the elbow region of the Fc appears to be conformation dependent and suggests a means of regulating the IgE-Fc conformation (and potentially receptor binding) with small molecules.

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Year:  2009        PMID: 19682998      PMCID: PMC2827403          DOI: 10.1016/j.jmb.2009.08.012

Source DB:  PubMed          Journal:  J Mol Biol        ISSN: 0022-2836            Impact factor:   5.469


  27 in total

1.  Treatment of allergic asthma with monoclonal anti-IgE antibody. rhuMAb-E25 Study Group.

Authors:  H Milgrom; R B Fick; J Q Su; J D Reimann; R K Bush; M L Watrous; W J Metzger
Journal:  N Engl J Med       Date:  1999-12-23       Impact factor: 91.245

2.  Convergent solutions to binding at a protein-protein interface.

Authors:  W L DeLano; M H Ultsch; A M de Vos; J A Wells
Journal:  Science       Date:  2000-02-18       Impact factor: 47.728

3.  Structure of the human IgE-Fc C epsilon 3-C epsilon 4 reveals conformational flexibility in the antibody effector domains.

Authors:  B A Wurzburg; S C Garman; T S Jardetzky
Journal:  Immunity       Date:  2000-09       Impact factor: 31.745

4.  WHAT IF: a molecular modeling and drug design program.

Authors:  G Vriend
Journal:  J Mol Graph       Date:  1990-03

5.  Version 1.2 of the Crystallography and NMR system.

Authors:  Axel T Brunger
Journal:  Nat Protoc       Date:  2007       Impact factor: 13.491

6.  Structure of human IgM rheumatoid factor Fab bound to its autoantigen IgG Fc reveals a novel topology of antibody-antigen interaction.

Authors:  A L Corper; M K Sohi; V R Bonagura; M Steinitz; R Jefferis; A Feinstein; D Beale; M J Taussig; B J Sutton
Journal:  Nat Struct Biol       Date:  1997-05

7.  Identification of contact residues in the IgE binding site of human FcepsilonRIalpha.

Authors:  J P Cook; A J Henry; J M McDonnell; R J Owens; B J Sutton; H J Gould
Journal:  Biochemistry       Date:  1997-12-16       Impact factor: 3.162

8.  Purification and characterization of human recombinant IgE-Fc fragments that bind to the human high affinity IgE receptor.

Authors:  M Basu; J Hakimi; E Dharm; J A Kondas; W H Tsien; R S Pilson; P Lin; A Gilfillan; P Haring; E H Braswell
Journal:  J Biol Chem       Date:  1993-06-25       Impact factor: 5.157

9.  The crystal structure of IgE Fc reveals an asymmetrically bent conformation.

Authors:  Tommy Wan; Rebecca L Beavil; Stella M Fabiane; Andrew J Beavil; Maninder K Sohi; Maura Keown; Robert J Young; Alistair J Henry; Ray J Owens; Hannah J Gould; Brian J Sutton
Journal:  Nat Immunol       Date:  2002-06-17       Impact factor: 25.606

10.  Phaser crystallographic software.

Authors:  Airlie J McCoy; Ralf W Grosse-Kunstleve; Paul D Adams; Martyn D Winn; Laurent C Storoni; Randy J Read
Journal:  J Appl Crystallogr       Date:  2007-07-13       Impact factor: 3.304

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  21 in total

1.  An engineered disulfide bond reversibly traps the IgE-Fc3-4 in a closed, nonreceptor binding conformation.

Authors:  Beth A Wurzburg; Beomkyu Kim; Svetlana S Tarchevskaya; Alexander Eggel; Monique Vogel; Theodore S Jardetzky
Journal:  J Biol Chem       Date:  2012-09-04       Impact factor: 5.157

2.  A novel structural unit in the N-terminal region of filamins.

Authors:  Ritika Sethi; Jonne Seppälä; Helena Tossavainen; Mikko Ylilauri; Salla Ruskamo; Olli T Pentikäinen; Ulla Pentikäinen; Perttu Permi; Jari Ylänne
Journal:  J Biol Chem       Date:  2014-01-27       Impact factor: 5.157

3.  A time-resolved fluorescence resonance energy transfer assay suitable for high-throughput screening for inhibitors of immunoglobulin E-receptor interactions.

Authors:  Beomkyu Kim; Svetlana S Tarchevskaya; Alexander Eggel; Monique Vogel; Theodore S Jardetzky
Journal:  Anal Biochem       Date:  2012-09-18       Impact factor: 3.365

4.  Crystal structure of IgE bound to its B-cell receptor CD23 reveals a mechanism of reciprocal allosteric inhibition with high affinity receptor FcεRI.

Authors:  Balvinder Dhaliwal; Daopeng Yuan; Marie O Y Pang; Alistair J Henry; Katharine Cain; Amanda Oxbrow; Stella M Fabiane; Andrew J Beavil; James M McDonnell; Hannah J Gould; Brian J Sutton
Journal:  Proc Natl Acad Sci U S A       Date:  2012-07-16       Impact factor: 11.205

5.  Conformational changes in IgE contribute to its uniquely slow dissociation rate from receptor FcɛRI.

Authors:  Mary D Holdom; Anna M Davies; Joanne E Nettleship; Sarah C Bagby; Balvinder Dhaliwal; Enrico Girardi; James Hunt; Hannah J Gould; Andrew J Beavil; James M McDonnell; Ray J Owens; Brian J Sutton
Journal:  Nat Struct Mol Biol       Date:  2011-04-24       Impact factor: 15.369

6.  Human immunoglobulin E flexes between acutely bent and extended conformations.

Authors:  Nyssa Drinkwater; Ben Cossins; Anthony H Keeble; Michael Wright; Katharine Cain; Hanna Hailu; Amanda Oxbrow; Jean Delgado; Lindsay K Shuttleworth; Michael W-P Kao; James M McDonnell; Andrew J Beavil; Alistair J Henry; Brian J Sutton
Journal:  Nat Struct Mol Biol       Date:  2014-03-16       Impact factor: 15.369

7.  Accelerated disassembly of IgE-receptor complexes by a disruptive macromolecular inhibitor.

Authors:  Beomkyu Kim; Alexander Eggel; Svetlana S Tarchevskaya; Monique Vogel; Heino Prinz; Theodore S Jardetzky
Journal:  Nature       Date:  2012-10-28       Impact factor: 49.962

8.  Ca2+-dependent structural changes in the B-cell receptor CD23 increase its affinity for human immunoglobulin E.

Authors:  Daopeng Yuan; Anthony H Keeble; Richard G Hibbert; Stella Fabiane; Hannah J Gould; James M McDonnell; Andrew J Beavil; Brian J Sutton; Balvinder Dhaliwal
Journal:  J Biol Chem       Date:  2013-06-17       Impact factor: 5.157

9.  Conformational plasticity at the IgE-binding site of the B-cell receptor CD23.

Authors:  Balvinder Dhaliwal; Marie O Y Pang; Daopeng Yuan; Norhakim Yahya; Stella M Fabiane; James M McDonnell; Hannah J Gould; Andrew J Beavil; Brian J Sutton
Journal:  Mol Immunol       Date:  2013-08-07       Impact factor: 4.407

10.  A range of Cℇ3-Cℇ4 interdomain angles in IgE Fc accommodate binding to its receptor CD23.

Authors:  Balvinder Dhaliwal; Marie O Y Pang; Daopeng Yuan; Andrew J Beavil; Brian J Sutton
Journal:  Acta Crystallogr F Struct Biol Commun       Date:  2014-02-20       Impact factor: 1.056

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