Literature DB >> 19679082

Catalytically incompetent by design.

Rong Gao, Ann M Stock.   

Abstract

Sondermann and colleagues have characterized FimX, a protein with degenerate GGDEF and EAL domains. The study confirms the expected domain folds lacking conserved catalytic residues for c-di-GMP synthesis/degradation, and also defines domain arrangements, providing insight to regulatory mechanisms.

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Year:  2009        PMID： 19679082      PMCID： PMC2771337          DOI： 10.1016/j.str.2009.07.004

Source DB:  PubMed          Journal:  Structure        ISSN： 0969-2126            Impact factor:   5.006


  11 in total

1.  Identification and characterization of a cyclic di-GMP-specific phosphodiesterase and its allosteric control by GTP.

Authors:  Matthias Christen; Beat Christen; Marc Folcher; Alexandra Schauerte; Urs Jenal
Journal:  J Biol Chem       Date:  2005-07-01       Impact factor: 5.157

2.  The ubiquitous protein domain EAL is a cyclic diguanylate-specific phosphodiesterase: enzymatically active and inactive EAL domains.

Authors:  Andrew J Schmidt; Dmitri A Ryjenkov; Mark Gomelsky
Journal:  J Bacteriol       Date:  2005-07       Impact factor: 3.490

Review 3.  Principles of c-di-GMP signalling in bacteria.

Authors:  Regine Hengge
Journal:  Nat Rev Microbiol       Date:  2009-04       Impact factor: 60.633

4.  Biological insights from structures of two-component proteins.

Authors:  Rong Gao; Ann M Stock
Journal:  Annu Rev Microbiol       Date:  2009       Impact factor: 15.500

5.  Structure and mechanism of a bacterial light-regulated cyclic nucleotide phosphodiesterase.

Authors:  Thomas R M Barends; Elisabeth Hartmann; Julia J Griese; Thorsten Beitlich; Natalia V Kirienko; Dmitri A Ryjenkov; Jochen Reinstein; Robert L Shoeman; Mark Gomelsky; Ilme Schlichting
Journal:  Nature       Date:  2009-06-18       Impact factor: 49.962

6.  The functional role of a conserved loop in EAL domain-based cyclic di-GMP-specific phosphodiesterase.

Authors:  Feng Rao; Yaning Qi; Hui Shan Chong; Masayo Kotaka; Bin Li; Jinming Li; Julien Lescar; Kai Tang; Zhao-Xun Liang
Journal:  J Bacteriol       Date:  2009-04-17       Impact factor: 3.490

7.  Second messenger-mediated spatiotemporal control of protein degradation regulates bacterial cell cycle progression.

Authors:  Anna Duerig; Sören Abel; Marc Folcher; Micael Nicollier; Torsten Schwede; Nicolas Amiot; Bernd Giese; Urs Jenal
Journal:  Genes Dev       Date:  2009-01-01       Impact factor: 11.361

8.  Structure of BeF3- -modified response regulator PleD: implications for diguanylate cyclase activation, catalysis, and feedback inhibition.

Authors:  Paul Wassmann; Carmen Chan; Ralf Paul; Andreas Beck; Heiko Heerklotz; Urs Jenal; Tilman Schirmer
Journal:  Structure       Date:  2007-08       Impact factor: 5.006

9.  Crystal structures of YkuI and its complex with second messenger cyclic Di-GMP suggest catalytic mechanism of phosphodiester bond cleavage by EAL domains.

Authors:  George Minasov; Sivaraman Padavattan; Ludmilla Shuvalova; Joseph S Brunzelle; Darcie J Miller; Arnaud Baslé; Claudia Massa; Frank R Collart; Tilman Schirmer; Wayne F Anderson
Journal:  J Biol Chem       Date:  2009-02-24       Impact factor: 5.157

Review 10.  A census of membrane-bound and intracellular signal transduction proteins in bacteria: bacterial IQ, extroverts and introverts.

Authors:  Michael Y Galperin
Journal:  BMC Microbiol       Date:  2005-06-14       Impact factor: 3.605
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  3 in total

Review 1.  Sensing the messenger: the diverse ways that bacteria signal through c-di-GMP.

Authors:  Petya Violinova Krasteva; Krista Michelle Giglio; Holger Sondermann
Journal:  Protein Sci       Date:  2012-06-05       Impact factor: 6.725

2.  Effect of site-directed mutagenesis at the GGEEF domain of the biofilm forming GGEEF protein from Vibrio cholerae.

Authors:  Om Prakash Chouhan; Divya Bandekar; Mousumi Hazra; Ashish Baghudana; Saugata Hazra; Sumit Biswas
Journal:  AMB Express       Date:  2016-01-04       Impact factor: 3.298

3.  Hybrid histidine kinase activation by cyclic di-GMP-mediated domain liberation.

Authors:  Badri N Dubey; Elia Agustoni; Raphael Böhm; Andreas Kaczmarczyk; Francesca Mangia; Christoph von Arx; Urs Jenal; Sebastian Hiller; Iván Plaza-Menacho; Tilman Schirmer
Journal:  Proc Natl Acad Sci U S A       Date:  2019-12-27       Impact factor: 11.205
  3 in total

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