Literature DB >> 19675152

In folio respiratory fluxomics revealed by 13C isotopic labeling and H/D isotope effects highlight the noncyclic nature of the tricarboxylic acid "cycle" in illuminated leaves.

Guillaume Tcherkez1, Aline Mahé, Paul Gauthier, Caroline Mauve, Elizabeth Gout, Richard Bligny, Gabriel Cornic, Michael Hodges.   

Abstract

While the possible importance of the tricarboxylic acid (TCA) cycle reactions for leaf photosynthesis operation has been recognized, many uncertainties remain on whether TCA cycle biochemistry is similar in the light compared with the dark. It is widely accepted that leaf day respiration and the metabolic commitment to TCA decarboxylation are down-regulated in illuminated leaves. However, the metabolic basis (i.e. the limiting steps involved in such a down-regulation) is not well known. Here, we investigated the in vivo metabolic fluxes of individual reactions of the TCA cycle by developing two isotopic methods, (13)C tracing and fluxomics and the use of H/D isotope effects, with Xanthium strumarium leaves. We provide evidence that the TCA "cycle" does not work in the forward direction like a proper cycle but, rather, operates in both the reverse and forward directions to produce fumarate and glutamate, respectively. Such a functional division of the cycle plausibly reflects the compromise between two contrasted forces: (1) the feedback inhibition by NADH and ATP on TCA enzymes in the light, and (2) the need to provide pH-buffering organic acids and carbon skeletons for nitrate absorption and assimilation.

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Year:  2009        PMID: 19675152      PMCID: PMC2754646          DOI: 10.1104/pp.109.142976

Source DB:  PubMed          Journal:  Plant Physiol        ISSN: 0032-0889            Impact factor:   8.340


  35 in total

1.  Pea leaf mitochondrial pyruvate dehydrogenase complex is inactivated in vivo in a light-dependent manner.

Authors:  R J Budde; D D Randall
Journal:  Proc Natl Acad Sci U S A       Date:  1990-01       Impact factor: 11.205

2.  Glucose Dissimilation in the Higher Plant. Effect of Age of Tissue.

Authors:  M Gibbs; H Beevers
Journal:  Plant Physiol       Date:  1955-07       Impact factor: 8.340

Review 3.  Mitochondrial redox biology and homeostasis in plants.

Authors:  Graham Noctor; Rosine De Paepe; Christine H Foyer
Journal:  Trends Plant Sci       Date:  2007-02-12       Impact factor: 18.313

4.  In situ proton-NMR analyses of Escherichia coli HB101 fermentations in 1H2O and in D2O.

Authors:  L Brecker; H Weber; H Griengl; D W Ribbons
Journal:  Microbiology       Date:  1999-12       Impact factor: 2.777

Review 5.  Carbon and nitrogen assimilation in relation to yield: mechanisms are the key to understanding production systems.

Authors:  David W Lawlor
Journal:  J Exp Bot       Date:  2002-04       Impact factor: 6.992

6.  Interaction between photorespiration and respiration in transgenic potato plants with antisense reduction in glycine decarboxylase.

Authors:  Natalia V Bykova; Olav Keerberg; Tiit Pärnik; Hermann Bauwe; Per Gardeström
Journal:  Planta       Date:  2005-04-05       Impact factor: 4.116

7.  In Vivo Regulation of Wheat-Leaf Phosphoenolpyruvate Carboxylase by Reversible Phosphorylation.

Authors:  SMG. Duff; R. Chollet
Journal:  Plant Physiol       Date:  1995-03       Impact factor: 8.340

8.  Respiratory carbon metabolism following illumination in intact French bean leaves using (13)C/(12)C isotope labeling.

Authors:  Salvador Nogués; Guillaume Tcherkez; Gabriel Cornic; Jaleh Ghashghaie
Journal:  Plant Physiol       Date:  2004-09-17       Impact factor: 8.340

9.  Quantification of compartmented metabolic fluxes in maize root tips using isotope distribution from 13C- or 14C-labeled glucose.

Authors:  M Dieuaide-Noubhani; G Raffard; P Canioni; A Pradet; P Raymond
Journal:  J Biol Chem       Date:  1995-06-02       Impact factor: 5.157

10.  On the metabolic origin of the carbon isotope composition of CO2 evolved from darkened light-acclimated leaves in Ricinus communis.

Authors:  Arthur Gessler; Guillaume Tcherkez; Oka Karyanto; Claudia Keitel; Juan Pedro Ferrio; Jaleh Ghashghaie; Jürgen Kreuzwieser; Graham D Farquhar
Journal:  New Phytol       Date:  2009-01       Impact factor: 10.151

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  56 in total

1.  Isotopically nonstationary 13C flux analysis of changes in Arabidopsis thaliana leaf metabolism due to high light acclimation.

Authors:  Fangfang Ma; Lara J Jazmin; Jamey D Young; Doug K Allen
Journal:  Proc Natl Acad Sci U S A       Date:  2014-11-03       Impact factor: 11.205

2.  Diurnal changes in mitochondrial function reveal daily optimization of light and dark respiratory metabolism in Arabidopsis.

Authors:  Chun Pong Lee; Holger Eubel; A Harvey Millar
Journal:  Mol Cell Proteomics       Date:  2010-07-02       Impact factor: 5.911

3.  On the Evolutionary Origin of CAM Photosynthesis.

Authors:  Andrea Bräutigam; Urte Schlüter; Marion Eisenhut; Udo Gowik
Journal:  Plant Physiol       Date:  2017-04-17       Impact factor: 8.340

4.  Experimental evidence of phosphoenolpyruvate resynthesis from pyruvate in illuminated leaves.

Authors:  Guillaume Tcherkez; Aline Mahé; Edouard Boex-Fontvieille; Elisabeth Gout; Florence Guérard; Richard Bligny
Journal:  Plant Physiol       Date:  2011-07-05       Impact factor: 8.340

5.  Toward multifaceted roles of sucrose in the regulation of stomatal movement.

Authors:  V F Lima; D B Medeiros; L Dos Anjos; J Gago; A R Fernie; D M Daloso
Journal:  Plant Signal Behav       Date:  2018-08-01

6.  The Role of Abscisic Acid Signaling in Maintaining the Metabolic Balance Required for Arabidopsis Growth under Nonstress Conditions.

Authors:  Takuya Yoshida; Toshihiro Obata; Regina Feil; John E Lunn; Yasunari Fujita; Kazuko Yamaguchi-Shinozaki; Alisdair R Fernie
Journal:  Plant Cell       Date:  2019-01-03       Impact factor: 11.277

7.  Mild reductions in cytosolic NADP-dependent isocitrate dehydrogenase activity result in lower amino acid contents and pigmentation without impacting growth.

Authors:  Ronan Sulpice; Agata Sienkiewicz-Porzucek; Sonia Osorio; Ina Krahnert; Mark Stitt; Alisdair R Fernie; Adriano Nunes-Nesi
Journal:  Amino Acids       Date:  2010-05-16       Impact factor: 3.520

8.  Influence of diurnal variation in mesophyll conductance on modelled 13C discrimination: results from a field study.

Authors:  Christopher P Bickford; David T Hanson; Nate G McDowell
Journal:  J Exp Bot       Date:  2010-05-25       Impact factor: 6.992

9.  Influence of mitochondrial genome rearrangement on cucumber leaf carbon and nitrogen metabolism.

Authors:  Bożena Szal; Agata Jastrzębska; Marek Kulka; Karolina Leśniak; Anna Podgórska; Tiit Pärnik; Hiie Ivanova; Olav Keerberg; Per Gardeström; Anna M Rychter
Journal:  Planta       Date:  2010-09-10       Impact factor: 4.116

10.  Metabolic fluxes in an illuminated Arabidopsis rosette.

Authors:  Marek Szecowka; Robert Heise; Takayuki Tohge; Adriano Nunes-Nesi; Daniel Vosloh; Jan Huege; Regina Feil; John Lunn; Zoran Nikoloski; Mark Stitt; Alisdair R Fernie; Stéphanie Arrivault
Journal:  Plant Cell       Date:  2013-02-26       Impact factor: 11.277

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