Literature DB >> 19672695

A proteomic analysis of oligo(dT)-bound mRNP containing oxidative stress-induced Arabidopsis thaliana RNA-binding proteins ATGRP7 and ATGRP8.

Fabian Schmidt1, Aline Marnef, Man-Kim Cheung, Ian Wilson, John Hancock, Dorothee Staiger, Michael Ladomery.   

Abstract

Plants are highly adapted to respond to a range of environmental stresses commonly by altering their gene expression and metabolism as a result of cell signalling which may be mediated by reactive oxygen species. The glycine-rich RNA-binding proteins ATGRP7 and ATGRP8 were rapidly upregulated in response to peroxide-induced oxidative stress and were amongst the most abundant RNA binding proteins isolated by oligo(dT) chromatography. The oligo(dT)-bound mRNP complexes were analysed proteomically, and were seen to contain potential isoforms of the ATGRP proteins; other proteins that contain an RNA Recognition Motif (RRM); and chloroplast RNA binding proteins. These findings suggest that ATGRP proteins have an evolutionarily conserved function in the regulation of gene expression at the posttranscriptional level in response to environmental stress.

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Year:  2009        PMID: 19672695     DOI: 10.1007/s11033-009-9636-x

Source DB:  PubMed          Journal:  Mol Biol Rep        ISSN: 0301-4851            Impact factor:   2.316


  24 in total

1.  Presence of WT1, the Wilm's tumor suppressor gene product, in nuclear poly(A)(+) ribonucleoprotein.

Authors:  M R Ladomery; J Slight; S Mc Ghee; N D Hastie
Journal:  J Biol Chem       Date:  1999-12-17       Impact factor: 5.157

2.  Auto-regulation of the circadian slave oscillator component AtGRP7 and regulation of its targets is impaired by a single RNA recognition motif point mutation.

Authors:  Jan C Schöning; Corinna Streitner; Damian R Page; Sven Hennig; Kenko Uchida; Eva Wolf; Masaki Furuya; Dorothee Staiger
Journal:  Plant J       Date:  2007-10-08       Impact factor: 6.417

3.  The splicing factor SRp20 modifies splicing of its own mRNA and ASF/SF2 antagonizes this regulation.

Authors:  H Jumaa; P J Nielsen
Journal:  EMBO J       Date:  1997-08-15       Impact factor: 11.598

4.  AtGRP7, a nuclear RNA-binding protein as a component of a circadian-regulated negative feedback loop in Arabidopsis thaliana.

Authors:  C Heintzen; M Nater; K Apel; D Staiger
Journal:  Proc Natl Acad Sci U S A       Date:  1997-08-05       Impact factor: 11.205

5.  A type III effector ADP-ribosylates RNA-binding proteins and quells plant immunity.

Authors:  Zheng Qing Fu; Ming Guo; Byeong-ryool Jeong; Fang Tian; Thomas E Elthon; Ronald L Cerny; Dorothee Staiger; James R Alfano
Journal:  Nature       Date:  2007-04-22       Impact factor: 49.962

6.  Translation regulatory factor RBM3 is a proto-oncogene that prevents mitotic catastrophe.

Authors:  S M Sureban; S Ramalingam; G Natarajan; R May; D Subramaniam; K S Bishnupuri; A R Morrison; B K Dieckgraefe; D J Brackett; R G Postier; C W Houchen; S Anant
Journal:  Oncogene       Date:  2008-04-21       Impact factor: 9.867

Review 7.  Hydrogen peroxide signalling.

Authors:  Steven Neill; Radhika Desikan; John Hancock
Journal:  Curr Opin Plant Biol       Date:  2002-10       Impact factor: 7.834

Review 8.  Posttranscriptional control of plant development.

Authors:  Yulan Cheng; Xuemei Chen
Journal:  Curr Opin Plant Biol       Date:  2004-02       Impact factor: 7.834

9.  Cold shock domain proteins and glycine-rich RNA-binding proteins from Arabidopsis thaliana can promote the cold adaptation process in Escherichia coli.

Authors:  Jin Sun Kim; Su Jung Park; Kyung Jin Kwak; Yeon Ok Kim; Joo Yeol Kim; Jinkyung Song; Boseung Jang; Che-Hun Jung; Hunseung Kang
Journal:  Nucleic Acids Res       Date:  2006-12-14       Impact factor: 16.971

10.  AtGRP7 is involved in the regulation of abscisic acid and stress responses in Arabidopsis.

Authors:  Shuqing Cao; Li Jiang; Shiyong Song; Ran Jing; Guosheng Xu
Journal:  Cell Mol Biol Lett       Date:  2006-09-26       Impact factor: 5.787

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  36 in total

Review 1.  Spotlight on post-transcriptional control in the circadian system.

Authors:  Dorothee Staiger; Tino Köster
Journal:  Cell Mol Life Sci       Date:  2010-08-30       Impact factor: 9.261

2.  Using high competent shoot apical meristems of cockscomb as explants for studying function of ASYMMETRIC LEAVES2-LIKE11 (ASL11) gene of Arabidopsis.

Authors:  Shao-Bo Sun; Lai-Sheng Meng; Xu-Dong Sun; Zhen-Hua Feng
Journal:  Mol Biol Rep       Date:  2010-03-21       Impact factor: 2.316

3.  Ectopic expression of a grapevine transcription factor VvWRKY11 contributes to osmotic stress tolerance in Arabidopsis.

Authors:  Huaying Liu; Wenlong Yang; Dongcheng Liu; Yuepeng Han; Aimin Zhang; Shaohua Li
Journal:  Mol Biol Rep       Date:  2010-03-31       Impact factor: 2.316

Review 4.  Alternative splicing at the intersection of biological timing, development, and stress responses.

Authors:  Dorothee Staiger; John W S Brown
Journal:  Plant Cell       Date:  2013-10-31       Impact factor: 11.277

5.  Structure function analysis of an ADP-ribosyltransferase type III effector and its RNA-binding target in plant immunity.

Authors:  Byeong-ryool Jeong; Yan Lin; Anna Joe; Ming Guo; Christin Korneli; Huirong Yang; Ping Wang; Min Yu; Ronald L Cerny; Dorothee Staiger; James R Alfano; Yanhui Xu
Journal:  J Biol Chem       Date:  2011-10-19       Impact factor: 5.157

6.  Phylogenetic and expression analysis of RNA-binding proteins with triple RNA recognition motifs in plants.

Authors:  Lila Peal; Niranjani Jambunathan; Ramamurthy Mahalingam
Journal:  Mol Cells       Date:  2010-11-25       Impact factor: 5.034

7.  In-depth temporal transcriptome profiling reveals a crucial developmental switch with roles for RNA processing and organelle metabolism that are essential for germination in Arabidopsis.

Authors:  Reena Narsai; Simon R Law; Chris Carrie; Lin Xu; James Whelan
Journal:  Plant Physiol       Date:  2011-09-09       Impact factor: 8.340

8.  A glycine-rich RNA-binding protein affects gibberellin biosynthesis in Arabidopsis.

Authors:  B Löhr; C Streitner; A Steffen; T Lange; D Staiger
Journal:  Mol Biol Rep       Date:  2013-11-27       Impact factor: 2.316

Review 9.  Genomic era analyses of RNA secondary structure and RNA-binding proteins reveal their significance to post-transcriptional regulation in plants.

Authors:  Ian M Silverman; Fan Li; Brian D Gregory
Journal:  Plant Sci       Date:  2013-02-01       Impact factor: 4.729

10.  Identification of potential cargo proteins of transportin protein AtTRN1 in Arabidopsis thaliana.

Authors:  Bo Yan; Xiaoning Wang; Zhenyu Wang; Ni Chen; Changjun Mu; Kaili Mao; Lirong Han; Wei Zhang; Heng Liu
Journal:  Plant Cell Rep       Date:  2015-12-09       Impact factor: 4.570

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