Literature DB >> 19661429

The C-Ala domain brings together editing and aminoacylation functions on one tRNA.

Min Guo1, Yeeting E Chong, Kirk Beebe, Ryan Shapiro, Xiang-Lei Yang, Paul Schimmel.   

Abstract

Protein synthesis involves the accurate attachment of amino acids to their matching transfer RNA (tRNA) molecules. Mistranslating the amino acids serine or glycine for alanine is prevented by the function of independent but collaborative aminoacylation and editing domains of alanyl-tRNA synthetases (AlaRSs). We show that the C-Ala domain plays a key role in AlaRS function. The C-Ala domain is universally tethered to the editing domain both in AlaRS and in many homologous free-standing editing proteins. Crystal structure and functional analyses showed that C-Ala forms an ancient single-stranded nucleic acid binding motif that promotes cooperative binding of both aminoacylation and editing domains to tRNA(Ala). In addition, C-Ala may have played an essential role in the evolution of AlaRSs by coupling aminoacylation to editing to prevent mistranslation.

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Year:  2009        PMID: 19661429      PMCID: PMC4559334          DOI: 10.1126/science.1174343

Source DB:  PubMed          Journal:  Science        ISSN: 0036-8075            Impact factor:   47.728


  31 in total

1.  Simultaneous binding of two proteins to opposite sides of a single transfer RNA.

Authors:  T Nomanbhoy; A J Morales; A T Abraham; C S Vörtler; R Giegé; P Schimmel
Journal:  Nat Struct Biol       Date:  2001-04

2.  Enlarging the amino acid set of Escherichia coli by infiltration of the valine coding pathway.

Authors:  V Döring; H D Mootz; L A Nangle; T L Hendrickson; V de Crécy-Lagard; P Schimmel; P Marlière
Journal:  Science       Date:  2001-04-20       Impact factor: 47.728

3.  Trans-editing of mischarged tRNAs.

Authors:  Ivan Ahel; Dragana Korencic; Michael Ibba; Dieter Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2003-12-08       Impact factor: 11.205

4.  Global effects of mistranslation from an editing defect in mammalian cells.

Authors:  Leslie A Nangle; Candace M Motta; Paul Schimmel
Journal:  Chem Biol       Date:  2006-10

5.  Transfer RNA-mediated editing in threonyl-tRNA synthetase. The class II solution to the double discrimination problem.

Authors:  A Dock-Bregeon; R Sankaranarayanan; P Romby; J Caillet; M Springer; B Rees; C S Francklyn; C Ehresmann; D Moras
Journal:  Cell       Date:  2000-12-08       Impact factor: 41.582

6.  The C-terminal domain of the archaeal leucyl-tRNA synthetase prevents misediting of isoleucyl-tRNA(Ile).

Authors:  Ryuya Fukunaga; Shigeyuki Yokoyama
Journal:  Biochemistry       Date:  2007-04-04       Impact factor: 3.162

7.  The crystal structure of exonuclease RecJ bound to Mn2+ ion suggests how its characteristic motifs are involved in exonuclease activity.

Authors:  Atsushi Yamagata; Yoshimitsu Kakuta; Ryoji Masui; Keiichi Fukuyama
Journal:  Proc Natl Acad Sci U S A       Date:  2002-04-23       Impact factor: 11.205

8.  A freestanding proofreading domain is required for protein synthesis quality control in Archaea.

Authors:  Dragana Korencic; Ivan Ahel; James Schelert; Meik Sacher; Benfang Ruan; Constantinos Stathopoulos; Paul Blum; Michael Ibba; Dieter Söll
Journal:  Proc Natl Acad Sci U S A       Date:  2004-07-06       Impact factor: 11.205

9.  Distinct domains of tRNA synthetase recognize the same base pair.

Authors:  Kirk Beebe; Marissa Mock; Eve Merriman; Paul Schimmel
Journal:  Nature       Date:  2008-01-03       Impact factor: 49.962

10.  Natural homolog of tRNA synthetase editing domain rescues conditional lethality caused by mistranslation.

Authors:  Yeeting E Chong; Xiang-Lei Yang; Paul Schimmel
Journal:  J Biol Chem       Date:  2008-08-22       Impact factor: 5.157

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  44 in total

1.  Ancestral AlaX editing enzymes for control of genetic code fidelity are not tRNA-specific.

Authors:  Eva Maria Novoa; Oscar Vargas-Rodriguez; Stefanie Lange; Yuki Goto; Hiroaki Suga; Karin Musier-Forsyth; Lluís Ribas de Pouplana
Journal:  J Biol Chem       Date:  2015-02-27       Impact factor: 5.157

2.  p23H implicated as cis/trans regulator of AlaXp-directed editing for mammalian cell homeostasis.

Authors:  Mir Hussain Nawaz; Eve Merriman; Xiang-Lei Yang; Paul Schimmel
Journal:  Proc Natl Acad Sci U S A       Date:  2011-02-01       Impact factor: 11.205

3.  Evolution of the genetic code by incorporation of amino acids that improved or changed protein function.

Authors:  Brian R Francis
Journal:  J Mol Evol       Date:  2013-06-07       Impact factor: 2.395

4.  Introduction of a leucine half-zipper engenders multiple high-quality crystals of a recalcitrant tRNA synthetase.

Authors:  Min Guo; Ryan Shapiro; Paul Schimmel; Xiang-Lei Yang
Journal:  Acta Crystallogr D Biol Crystallogr       Date:  2010-02-12

5.  Alanyl-tRNA Synthetase 2 (AARS2)-Related Ataxia Without Leukoencephalopathy.

Authors:  Molly E Kuo; Anthony Antonellis; Vikram G Shakkottai
Journal:  Cerebellum       Date:  2020-02       Impact factor: 3.847

6.  Guanidine hydrochloride mediated denaturation of E. coli Alanyl-tRNA synthetase: identification of an inactive dimeric intermediate.

Authors:  Baisakhi Banerjee; Rajat Banerjee
Journal:  Protein J       Date:  2014-04       Impact factor: 2.371

7.  Packaging HIV virion components through dynamic equilibria of a human tRNA synthetase.

Authors:  Min Guo; Ryan Shapiro; Garrett M Morris; Xiang-Lei Yang; Paul Schimmel
Journal:  J Phys Chem B       Date:  2010-11-08       Impact factor: 2.991

Review 8.  Neurodegenerative Charcot-Marie-Tooth disease as a case study to decipher novel functions of aminoacyl-tRNA synthetases.

Authors:  Na Wei; Qian Zhang; Xiang-Lei Yang
Journal:  J Biol Chem       Date:  2019-01-14       Impact factor: 5.157

Review 9.  Functional expansion of human tRNA synthetases achieved by structural inventions.

Authors:  Min Guo; Paul Schimmel; Xiang-Lei Yang
Journal:  FEBS Lett       Date:  2010-01-21       Impact factor: 4.124

10.  Paradox of mistranslation of serine for alanine caused by AlaRS recognition dilemma.

Authors:  Min Guo; Yeeting E Chong; Ryan Shapiro; Kirk Beebe; Xiang-Lei Yang; Paul Schimmel
Journal:  Nature       Date:  2009-12-10       Impact factor: 49.962

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