Literature DB >> 19659323

Elucidating the origin of anomalous diffusion in crowded fluids.

Jedrzej Szymanski1, Matthias Weiss.   

Abstract

Anomalous diffusion in crowded fluids, e.g., in the cytoplasm of living cells, is a frequent phenomenon. So far, however, the associated stochastic process, i.e., the propagator of the random walk, has not been uncovered. Here we show by means of fluorescence correlation spectroscopy and simulations that the properties of crowding-induced subdiffusion are consistent with the predictions for fractional Brownian motion or obstructed (percolationlike) diffusion, both of which have stationary increments. In contrast, our experimental results cannot be explained by a continuous time random walk with its distinct non-Gaussian propagator.

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Year:  2009        PMID: 19659323     DOI: 10.1103/PhysRevLett.103.038102

Source DB:  PubMed          Journal:  Phys Rev Lett        ISSN: 0031-9007            Impact factor:   9.161


  44 in total

1.  Two-dimensional continuum percolation threshold for diffusing particles of nonzero radius.

Authors:  Michael J Saxton
Journal:  Biophys J       Date:  2010-09-08       Impact factor: 4.033

2.  Anomalous diffusion reports on the interaction of misfolded proteins with the quality control machinery in the endoplasmic reticulum.

Authors:  Nina Malchus; Matthias Weiss
Journal:  Biophys J       Date:  2010-08-09       Impact factor: 4.033

3.  Quantitative analysis of single particle trajectories: mean maximal excursion method.

Authors:  Vincent Tejedor; Olivier Bénichou; Raphael Voituriez; Ralf Jungmann; Friedrich Simmel; Christine Selhuber-Unkel; Lene B Oddershede; Ralf Metzler
Journal:  Biophys J       Date:  2010-04-07       Impact factor: 4.033

4.  Aging and nonergodicity beyond the Khinchin theorem.

Authors:  S Burov; R Metzler; E Barkai
Journal:  Proc Natl Acad Sci U S A       Date:  2010-07-12       Impact factor: 11.205

5.  Inferring diffusion dynamics from FCS in heterogeneous nuclear environments.

Authors:  Konstantinos Tsekouras; Amanda P Siegel; Richard N Day; Steve Pressé
Journal:  Biophys J       Date:  2015-07-07       Impact factor: 4.033

6.  Chromosomal locus tracking with proper accounting of static and dynamic errors.

Authors:  Mikael P Backlund; Ryan Joyner; W E Moerner
Journal:  Phys Rev E Stat Nonlin Soft Matter Phys       Date:  2015-06-29

7.  Correlating anomalous diffusion with lipid bilayer membrane structure using single molecule tracking and atomic force microscopy.

Authors:  Michael J Skaug; Roland Faller; Marjorie L Longo
Journal:  J Chem Phys       Date:  2011-06-07       Impact factor: 3.488

8.  Ergodic and nonergodic processes coexist in the plasma membrane as observed by single-molecule tracking.

Authors:  Aubrey V Weigel; Blair Simon; Michael M Tamkun; Diego Krapf
Journal:  Proc Natl Acad Sci U S A       Date:  2011-04-04       Impact factor: 11.205

9.  Subdiffusive Dynamics Lead to Depleted Particle Densities near Cellular Borders.

Authors:  William R Holmes
Journal:  Biophys J       Date:  2019-02-28       Impact factor: 4.033

10.  Crowding induces complex ergodic diffusion and dynamic elongation of large DNA molecules.

Authors:  Cole D Chapman; Stephanie Gorczyca; Rae M Robertson-Anderson
Journal:  Biophys J       Date:  2015-03-10       Impact factor: 4.033

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