Literature DB >> 19658725

Viscous drag effect in the flexural rigidity and cantilever stiffness of bio- and nano-filaments measured with the shooting-bead method.

Abdorreza Samarbakhsh1, Jack A Tuszynski.   

Abstract

The so-called shooting-bead method is a fast and easy experimental technique for evaluating cantilever stiffness and flexural rigidity of semiflexible to semirigid rodlike biological and nano-filaments based on the measurement of just two distances. In this paper we have derived the shooting-bead formula for cantilever stiffness and flexural rigidity taking into account the effects of the viscous drag force exerted on the filament itself. To this end, we have defined a key variable, called the filament energy-loss factor (or filament drag factor), which accounts for all the energy-loss effects. It has been shown that due to the logarithmic dependence of the filament energy-loss factor on the radius and the length of the filament, inclusion of this factor in the formula for the flexural rigidity has a very noticeable effect on the result even for very thin or long filaments. It has also been shown that the effect due to the consideration of filament energy-loss factor on calculation of the flexural rigidity increases with increasing the flexibility of the filament. We have also considered various sources of experimental error and estimated their effects.

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Year:  2009        PMID: 19658725     DOI: 10.1103/PhysRevE.80.011903

Source DB:  PubMed          Journal:  Phys Rev E Stat Nonlin Soft Matter Phys        ISSN: 1539-3755


  2 in total

1.  Correction of the viscous drag induced errors in macromolecular manipulation experiments using atomic force microscope.

Authors:  Runcong Liu; Marisa Roman; Guoliang Yang
Journal:  Rev Sci Instrum       Date:  2010-06       Impact factor: 1.523

2.  Vibrational dynamics of bio- and nano-filaments in viscous solution subjected to ultrasound: implications for microtubules.

Authors:  Abdorreza Samarbakhsh; Jack A Tuszynski
Journal:  Eur Biophys J       Date:  2011-05-28       Impact factor: 1.733

  2 in total

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