Literature DB >> 19656821

Neutrons for biologists: a beginner's guide, or why you should consider using neutrons.

Jeremy H Lakey1.   

Abstract

From the structures of isolated protein complexes to the molecular dynamics of whole cells, neutron methods can achieve a resolution in complex systems that is inaccessible to other techniques. Biology is fortunate in that it is rich in water and hydrogen, and this allows us to exploit the differential sensitivity of neutrons to this element and its major isotope, deuterium. Furthermore, neutrons exhibit wave properties that allow us to use them in similar ways to light, X-rays and electrons. This review aims to explain the basics of biological neutron science to encourage its greater use in solving difficult problems in the life sciences.

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Year:  2009        PMID: 19656821      PMCID: PMC2843970          DOI: 10.1098/rsif.2009.0156.focus

Source DB:  PubMed          Journal:  J R Soc Interface        ISSN: 1742-5662            Impact factor:   4.118


  28 in total

Review 1.  How soft is a protein? A protein dynamics force constant measured by neutron scattering.

Authors:  G Zaccai
Journal:  Science       Date:  2000-06-02       Impact factor: 47.728

2.  Three-dimensional structure of the bacterial protein-translocation complex SecYEG.

Authors:  Cécile Breyton; Winfried Haase; Tom A Rapoport; Werner Kühlbrandt; Ian Collinson
Journal:  Nature       Date:  2002-08-08       Impact factor: 49.962

3.  Combined study of X-ray reflectivity and atomic force microscopy on a surface-grafted phospholipid monolayer on a solid.

Authors:  Kwangmeyung Kim; Youngro Byun; Chulhee Kim; Tae Chul Kim; Do Young Noh; Kwanwoo Shin
Journal:  J Colloid Interface Sci       Date:  2005-04-01       Impact factor: 8.128

4.  An approach to prepare membrane proteins for single-molecule imaging.

Authors:  David A Cisneros; Daniel J Muller; Sofian M Daud; Jeremy H Lakey
Journal:  Angew Chem Int Ed Engl       Date:  2006-05-12       Impact factor: 15.336

5.  Self-recognition by an intrinsically disordered protein.

Authors:  Oliver Hecht; Helen Ridley; Ruth Boetzel; Allison Lewin; Nick Cull; David A Chalton; Jeremy H Lakey; Geoffrey R Moore
Journal:  FEBS Lett       Date:  2008-06-23       Impact factor: 4.124

6.  Synaptic arrangement of the neuroligin/beta-neurexin complex revealed by X-ray and neutron scattering.

Authors:  Davide Comoletti; Alexander Grishaev; Andrew E Whitten; Igor Tsigelny; Palmer Taylor; Jill Trewhella
Journal:  Structure       Date:  2007-06       Impact factor: 5.006

7.  Neutron scattering reveals extremely slow cell water in a Dead Sea organism.

Authors:  Moeava Tehei; Bruno Franzetti; Kathleen Wood; Frank Gabel; Elisa Fabiani; Marion Jasnin; Michaela Zamponi; Dieter Oesterhelt; Giuseppe Zaccai; Margaret Ginzburg; Ben-Zion Ginzburg
Journal:  Proc Natl Acad Sci U S A       Date:  2007-01-10       Impact factor: 11.205

8.  Detergent structure in tetragonal crystals of OmpF porin.

Authors:  E Pebay-Peyroula; R M Garavito; J P Rosenbusch; M Zulauf; P A Timmins
Journal:  Structure       Date:  1995-10-15       Impact factor: 5.006

9.  Cholesterol is found to reside in the center of a polyunsaturated lipid membrane.

Authors:  Thad A Harroun; John Katsaras; Stephen R Wassall
Journal:  Biochemistry       Date:  2008-06-11       Impact factor: 3.162

10.  Low-barrier hydrogen bond in photoactive yellow protein.

Authors:  Shigeo Yamaguchi; Hironari Kamikubo; Kazuo Kurihara; Ryota Kuroki; Nobuo Niimura; Nobutaka Shimizu; Yoichi Yamazaki; Mikio Kataoka
Journal:  Proc Natl Acad Sci U S A       Date:  2009-01-02       Impact factor: 11.205

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  11 in total

Review 1.  Biophysics of α-synuclein membrane interactions.

Authors:  Candace M Pfefferkorn; Zhiping Jiang; Jennifer C Lee
Journal:  Biochim Biophys Acta       Date:  2011-07-28

2.  Biological physics at large facilities: from molecule to cell.

Authors:  Giuseppe Zaccai
Journal:  J R Soc Interface       Date:  2009-07-29       Impact factor: 4.118

3.  Reconstitution of a nanomachine driving the assembly of proteins into bacterial outer membranes.

Authors:  Denisse L Leyton; Takuya Shiota; Hsin-Hui Shen; Matthew J Belousoff; Nicholas Noinaj; Jingxiong Lu; Stephen A Holt; Khershing Tan; Joel Selkrig; Chaille T Webb; Susan K Buchanan; Lisandra L Martin; Trevor Lithgow
Journal:  Nat Commun       Date:  2014-10-24       Impact factor: 14.919

Review 4.  Zooming in on disordered systems: neutron reflection studies of proteins associated with fluid membranes.

Authors:  Frank Heinrich; Mathias Lösche
Journal:  Biochim Biophys Acta       Date:  2014-03-25

5.  Antibody adsorption on the surface of water studied by neutron reflection.

Authors:  Charles Smith; Zongyi Li; Robert Holman; Fang Pan; Richard A Campbell; Mario Campana; Peixun Li; John R P Webster; Steven Bishop; Rojaramani Narwal; Shahid Uddin; Christopher F van der Walle; Jian R Lu
Journal:  MAbs       Date:  2017-02-10       Impact factor: 5.857

6.  Preparing monodisperse macromolecular samples for successful biological small-angle X-ray and neutron-scattering experiments.

Authors:  Cy M Jeffries; Melissa A Graewert; Clément E Blanchet; David B Langley; Andrew E Whitten; Dmitri I Svergun
Journal:  Nat Protoc       Date:  2016-10-06       Impact factor: 13.491

7.  Depth of α-synuclein in a bilayer determined by fluorescence, neutron reflectometry, and computation.

Authors:  Candace M Pfefferkorn; Frank Heinrich; Alexander J Sodt; Alexander S Maltsev; Richard W Pastor; Jennifer C Lee
Journal:  Biophys J       Date:  2012-02-07       Impact factor: 4.033

8.  Using refnx to Model Neutron Reflectometry Data from Phospholipid Bilayers.

Authors:  Stephen A Holt; Tara E Oliver; Andrew R J Nelson
Journal:  Methods Mol Biol       Date:  2022

9.  Adsorption behavior of a human monoclonal antibody at hydrophilic and hydrophobic surfaces.

Authors:  Ruairidh G Couston; Maximilian W Skoda; Shahid Uddin; Christopher F van der Walle
Journal:  MAbs       Date:  2012-11-29       Impact factor: 5.857

10.  Structural Biology: A Century-long Journey into an Unseen World.

Authors:  Stephen Curry
Journal:  Interdiscip Sci Rev       Date:  2015-12-07       Impact factor: 1.000

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