Literature DB >> 19654337

Sphingosinicella vermicomposti sp. nov., isolated from vermicompost, and emended description of the genus Sphingosinicella.

Muhammad Yasir1, Zubair Aslam1, Geun Cheol Song1, Che Ok Jeon2, Young Ryun Chung1.   

Abstract

A Gram-stain-negative, rod-shaped bacterium, designated strain YC7378(T) was isolated from vermicompost (VC) collected at Masan, Korea, and its taxonomic position was investigated by using a polyphasic approach. Strain YC7378(T) grew optimally at 30 degrees C and at pH 6.5-8.5. Phylogenetic analysis based on 16S rRNA gene sequences indicated that strain YC7378(T) belongs to the genus Sphingosinicella in the family Sphingomonadaceae. The most closely related strains are Sphingosinicella soli KSL-125(T) (95.7 %), Sphingosinicella xenopeptidilytica 3-2W4(T) (95.6 %) and Sphingosinicella microcystinivorans Y2(T) (95.5 %). Strain YC7378(T) contained ubiquinone Q-10 as the major respiratory quinone system and sym-homospermidine as the major polyamine. The major fatty acids of strain YC7378(T) were C(18 : 1)omega7c, C(16 : 1)omega7c and/or iso-C(15 : 0) 2-OH, C(14 : 0) 2-OH and C(16 : 0). The major polar lipids were sphingoglycolipid, diphosphatidylglycerol, phosphatidylglycerol and phosphatidylethanolamine. The total DNA G+C content was 59.4 mol%. The phenotypic, phylogenetic and chemotaxonomic data showed that strain YC7378(T) represents a novel species of the genus Sphingosinicella, for which the name Sphingosinicella vermicomposti sp. nov. is proposed. The type strain is YC7378(T) (=KCTC 22446(T) =DSM 21593(T)).

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Year:  2009        PMID: 19654337     DOI: 10.1099/ijs.0.010777-0

Source DB:  PubMed          Journal:  Int J Syst Evol Microbiol        ISSN: 1466-5026            Impact factor:   2.747


  6 in total

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Journal:  Curr Microbiol       Date:  2016-06-04       Impact factor: 2.188

2.  Sphingomonas montis sp. nov., Isolated from Forest Soil of Low-Altitude Mountain.

Authors:  Dhiraj Kumar Chaudhary; Ram Hari Dahal; Jaisoo Kim
Journal:  Curr Microbiol       Date:  2018-06-05       Impact factor: 2.188

3.  Sphingosinicella ginsenosidimutans sp. nov., with ginsenoside converting activity.

Authors:  Jin-Kwang Kim; Myung-Suk Kang; Sung Chul Park; Kyeng-Min Kim; Kangduk Choi; Min-Ho Yoon; Wan-Taek Im
Journal:  J Microbiol       Date:  2015-06-27       Impact factor: 3.422

4.  Sphingosinicella terrae sp. nov. Isolated from a Desert Soil and Reclassification of Sphingomonas deserti as Sphingosinicella deserti comb. nov.

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5.  Bacillus oryzicola sp. nov., an Endophytic Bacterium Isolated from the Roots of Rice with Antimicrobial, Plant Growth Promoting, and Systemic Resistance Inducing Activities in Rice.

Authors:  Eu Jin Chung; Mohammad Tofajjal Hossain; Ajmal Khan; Kyung Hyun Kim; Che Ok Jeon; Young Ryun Chung
Journal:  Plant Pathol J       Date:  2015-06-30       Impact factor: 1.795

6.  Whole genome sequencing and analysis reveal insights into the genetic structure, diversity and evolutionary relatedness of luxI and luxR homologs in bacteria belonging to the Sphingomonadaceae family.

Authors:  Han Ming Gan; Huan You Gan; Nurul H Ahmad; Nazrin A Aziz; André O Hudson; Michael A Savka
Journal:  Front Cell Infect Microbiol       Date:  2015-01-08       Impact factor: 5.293

  6 in total

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